Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 PPIAP6-201ENST00000557078 499 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 MIR3912-201ENST00000577566 105 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC015917.1-201ENST00000579654 510 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL078623.1-201ENST00000602702 907 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL122125.1-201ENST00000616999 600 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AL354718.1-201ENST00000619764 589 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 AC140479.4-205ENST00000636339 820 ntBASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.17□□□□□ -1.42
ATG4DQ86TL0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC018765.1-201ENST00000623357 3446 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AP005901.5-201ENST00000545779 1796 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RNA5SP176-201ENST00000390956 110 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RNU6-780P-201ENST00000391030 104 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RAB5CP1-201ENST00000395972 580 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 GSTA12P-201ENST00000402398 508 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RN7SKP56-201ENST00000410513 331 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RPS26P38-201ENST00000414476 348 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC007390.1-201ENST00000415722 356 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC104843.2-201ENST00000427666 297 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AL512649.1-201ENST00000428997 581 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AL035458.1-201ENST00000433096 585 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 PSMD8P1-201ENST00000436275 769 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RPL7AP71-201ENST00000451120 739 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC079395.1-201ENST00000510981 262 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RN7SKP141-201ENST00000516167 338 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 CARSP2-201ENST00000520688 277 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AP000662.1-201ENST00000530952 487 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC089984.3-201ENST00000552838 363 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 PSMA3P-201ENST00000555485 635 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 NPM1P5-201ENST00000557228 838 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 MRPS21P9-201ENST00000571150 257 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 ARGFXP2-201ENST00000579304 949 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 VN1R79P-201ENST00000593540 513 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 SUMO2P14-201ENST00000604488 293 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC018816.2-201ENST00000621460 353 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC073862.4-201ENST00000622982 854 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 AC120349.2-201ENST00000625002 298 ntBASIC6.16□□□□□ -1.42
ATG4DQ86TL0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.16□□□□□ -1.42
ATG4DQ86TL0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms