Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 TCP11X1-202ENST00000622971 1372 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RNU6-249P-201ENST00000363016 102 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RNU6-618P-201ENST00000363518 112 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RN7SKP113-201ENST00000363891 295 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 SNORA2.3-201ENST00000383920 135 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 RPL10P10-201ENST00000403509 664 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC211486.3-201ENST00000412694 621 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC108075.1-201ENST00000424692 529 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 ARAFP2-201ENST00000440565 559 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC108693.1-201ENST00000496068 432 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 LSM3P2-201ENST00000551246 273 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AGGF1P9-201ENST00000561884 913 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AL133406.3-201ENST00000606817 541 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC015922.4-201ENST00000612568 690 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC004477.3-201ENST00000614061 590 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC136428.4-201ENST00000634254 1155 ntBASIC5.34□□□□□ -1.55
LRRC38Q5VT99 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRC38Q5VT99 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
LRRC38Q5VT99 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.34□□□□□ -1.56
LRRC38Q5VT99 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 PANDAR-201ENST00000629595 1506 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 RNU6-819P-201ENST00000364116 107 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 RPL7L1P9-201ENST00000431298 745 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AL138787.1-202ENST00000437804 898 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AP002981.1-201ENST00000517692 975 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AP000859.1-201ENST00000525536 307 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 OR4A46P-201ENST00000527255 933 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC024940.3-201ENST00000538551 316 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AL049779.2-201ENST00000553847 315 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC127381.1-201ENST00000555979 939 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC116553.2-201ENST00000564203 463 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AC009852.2-201ENST00000567898 485 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 AP001962.1-201ENST00000624114 559 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 CASC19-264ENST00000641912 1184 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 MAPK10-338ENST00000641647 3362 ntBASIC5.33□□□□□ -1.56
LRRC38Q5VT99 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
LRRC38Q5VT99 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 KARSP1-201ENST00000451871 1752 ntBASIC5.32□□□□□ -1.56
LRRC38Q5VT99 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
LRRC38Q5VT99 MIR600-201ENST00000385007 98 ntBASIC5.32□□□□□ -1.56
LRRC38Q5VT99 AC013442.1-201ENST00000397347 228 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms