Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 CBX3P1-201ENST00000325243 554 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 OR56A4-201ENST00000330728 1209 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 Y_RNA.372-201ENST00000365599 102 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 PPIAP26-201ENST00000377951 522 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 RNU6-297P-201ENST00000384636 107 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDH1Q08174 RNU6-1300P-201ENST00000391046 108 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 FCF1P10-201ENST00000407590 479 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 RN7SKP285-201ENST00000410137 318 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 RN7SKP30-201ENST00000411373 334 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC068533.2-201ENST00000411872 306 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AIMP1P1-201ENST00000418670 937 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 MTND4LP10-201ENST00000435146 291 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 MYL6P3-201ENST00000436904 432 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 PPIAP17-201ENST00000438507 471 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 BX248409.1-201ENST00000455497 255 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC010878.1-201ENST00000456500 1047 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 RN7SL379P-201ENST00000479912 293 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC104687.1-201ENST00000485829 412 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC069439.1-201ENST00000494739 167 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC111193.1-201ENST00000504097 155 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 STMN1P2-201ENST00000508435 439 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC007537.1-201ENST00000539347 327 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC026458.1-201ENST00000564330 438 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC127024.5-201ENST00000580085 462 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 SIGLEC31P-201ENST00000594237 551 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AL031777.2-201ENST00000611953 196 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC002553.4-201ENST00000616896 331 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDH1Q08174 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC119674.1-204ENST00000641348 1343 ntBASIC6.67□□□□□ -1.34
PCDH1Q08174 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.67□□□□□ -1.34
PCDH1Q08174 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PCDH1Q08174 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.66□□□□□ -1.34
PCDH1Q08174 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH1Q08174 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH1Q08174 AC023886.2-201ENST00000321285 411 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PCDH1Q08174 RNU5F-6P-201ENST00000362979 116 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 RNU6-116P-201ENST00000384042 109 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 RNU6-98P-201ENST00000384173 107 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PCDH1Q08174 CCNG1P1-201ENST00000406783 885 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 RNU6-248P-201ENST00000410720 107 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 OFD1P18Y-201ENST00000420889 959 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 FDPSP6-201ENST00000425091 512 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC007742.1-201ENST00000425789 329 ntBASIC6.66□□□□□ -1.34
PCDH1Q08174 AC018804.1-201ENST00000430381 618 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms