Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC092451.2-201ENST00000538746 658 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.71□□□□□ -1.5
HDAC4P56524 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.71□□□□□ -1.5
HDAC4P56524 OR11H3P-201ENST00000554547 982 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC092868.3-201ENST00000560515 784 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AP000769.2-201ENST00000602344 396 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.71□□□□□ -1.5
HDAC4P56524 AL133247.2-201ENST00000603236 482 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC104695.2-201ENST00000605056 775 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC007786.3-201ENST00000615154 596 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC105105.5-201ENST00000622635 1294 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AP003499.2-201ENST00000624100 483 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC135068.5-201ENST00000624197 983 ntBASIC5.71□□□□□ -1.5
HDAC4P56524 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HDAC4P56524 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
HDAC4P56524 AC002525.1-201ENST00000624392 1622 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.7□□□□□ -1.5
HDAC4P56524 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HDAC4P56524 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC100757.1-201ENST00000616872 1835 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
HDAC4P56524 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC092681.1-201ENST00000297369 291 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HDAC4P56524 RNU4-2-201ENST00000365668 141 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 SNORD56.6-201ENST00000384569 71 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AL391422.1-201ENST00000402155 436 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 PPIAP9-201ENST00000403866 498 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AC073464.3-201ENST00000422564 712 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC012075.1-201ENST00000436549 580 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 SCAND3P1-201ENST00000439854 1060 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 RANP1-206ENST00000455094 651 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AC110749.1-201ENST00000462007 357 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AC104629.2-201ENST00000468627 598 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.7□□□□□ -1.5
HDAC4P56524 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.7□□□□□ -1.5
HDAC4P56524 FABP5P6-201ENST00000510588 409 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 AL671309.1-201ENST00000603750 544 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 RMST_5.1-201ENST00000618704 126 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC106858.1-201ENST00000637497 429 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HDAC4P56524 AC073869.8-201ENST00000641806 335 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HDAC4P56524 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 AC083843.2-201ENST00000568248 6253 ntBASIC5.7□□□□□ -1.5
HDAC4P56524 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HDAC4P56524 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HDAC4P56524 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 AP001002.1-201ENST00000625148 1513 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.69□□□□□ -1.5
HDAC4P56524 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HDAC4P56524 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HDAC4P56524 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.69□□□□□ -1.5
HDAC4P56524 RNU6-729P-201ENST00000384399 107 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 SETP15-201ENST00000412724 337 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC079809.1-201ENST00000415468 276 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 MTND2P9-201ENST00000422293 931 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 EIF2S2P4-201ENST00000461070 984 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 RN7SL629P-201ENST00000489622 285 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AC093890.1-201ENST00000502554 540 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.69□□□□□ -1.5
HDAC4P56524 RNU6-889P-201ENST00000517189 103 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.69□□□□□ -1.5
HDAC4P56524 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HDAC4P56524 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
HDAC4P56524 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC022404.1-201ENST00000555320 273 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 SETP1-201ENST00000556014 845 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.69□□□□□ -1.5
HDAC4P56524 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.69□□□□□ -1.5
HDAC4P56524 BNIP3P39-201ENST00000601077 554 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AC098483.2-201ENST00000603158 454 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.69□□□□□ -1.5
HDAC4P56524 AL355802.4-201ENST00000607635 548 ntBASIC5.69□□□□□ -1.5
HDAC4P56524 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.69□□□□□ -1.5
HDAC4P56524 AC010632.3-201ENST00000611377 369 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms