Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH13P55290 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH13P55290 LSM3P2-201ENST00000551246 273 ntBASIC5.21□□□□□ -1.58
CDH13P55290 RN7SL356P-201ENST00000582228 248 ntBASIC5.21□□□□□ -1.58
CDH13P55290 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH13P55290 AC109583.2-201ENST00000617367 129 ntBASIC5.21□□□□□ -1.58
CDH13P55290 AP000720.1-201ENST00000625091 483 ntBASIC5.21□□□□□ -1.58
CDH13P55290 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH13P55290 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.21□□□□□ -1.58
CDH13P55290 AC068446.1-201ENST00000556425 1549 ntBASIC5.21□□□□□ -1.58
CDH13P55290 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH13P55290 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH13P55290 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 AC097461.1-201ENST00000568928 2821 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AL603750.1-201ENST00000624216 1717 ntBASIC5.2□□□□□ -1.58
CDH13P55290 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 AC073136.1-201ENST00000449426 2884 ntBASIC5.2□□□□□ -1.58
CDH13P55290 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 LINC01963-201ENST00000562038 3148 ntBASIC5.2□□□□□ -1.58
CDH13P55290 OR13C1P-202ENST00000641378 2919 ntBASIC5.2□□□□□ -1.58
CDH13P55290 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 Y_RNA.110-201ENST00000363220 99 ntBASIC5.2□□□□□ -1.58
CDH13P55290 RN7SKP292-201ENST00000365522 317 ntBASIC5.2□□□□□ -1.58
CDH13P55290 MIR621-201ENST00000384919 96 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AL356057.1-202ENST00000402263 756 ntBASIC5.2□□□□□ -1.58
CDH13P55290 OR4K12P-201ENST00000406538 961 ntBASIC5.2□□□□□ -1.58
CDH13P55290 BMS1P17-202ENST00000416720 316 ntBASIC5.2□□□□□ -1.58
CDH13P55290 IPPKP1-201ENST00000422501 768 ntBASIC5.2□□□□□ -1.58
CDH13P55290 RPL23AP4-201ENST00000427757 463 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC124944.2-201ENST00000429866 1242 ntBASIC5.2□□□□□ -1.58
CDH13P55290 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH13P55290 SUMO2P1-206ENST00000445436 284 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 NOP56P2-201ENST00000447491 769 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AL672138.1-201ENST00000450604 1015 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH13P55290 MTND2P30-201ENST00000456663 382 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC092691.2-201ENST00000461787 803 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC020779.1-201ENST00000478757 796 ntBASIC5.2□□□□□ -1.58
CDH13P55290 RPL7P41-201ENST00000485823 957 ntBASIC5.2□□□□□ -1.58
CDH13P55290 MTCO1P31-201ENST00000506355 492 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC008628.1-201ENST00000508663 265 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH13P55290 BTG4P1-201ENST00000510421 183 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH13P55290 SNORD46.2-201ENST00000516021 102 ntBASIC5.2□□□□□ -1.58
CDH13P55290 SNORA26.10-201ENST00000516427 141 ntBASIC5.2□□□□□ -1.58
CDH13P55290 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH13P55290 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH13P55290 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH13P55290 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH13P55290 AC106730.2-201ENST00000566641 540 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH13P55290 MTND4LP25-201ENST00000570218 163 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH13P55290 AC005242.1-201ENST00000585658 438 ntBASIC5.2□□□□□ -1.58
CDH13P55290 ADAD1P2-201ENST00000588476 646 ntBASIC5.2□□□□□ -1.58
CDH13P55290 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH13P55290 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 MIR6839-201ENST00000620425 113 ntBASIC5.2□□□□□ -1.58
CDH13P55290 CU639417.4-201ENST00000623928 207 ntBASIC5.2□□□□□ -1.58
CDH13P55290 AC007683.2-201ENST00000624681 714 ntBASIC5.2□□□□□ -1.58
CDH13P55290 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH13P55290 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH13P55290 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CDH13P55290 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 VPS35P1-201ENST00000563400 1518 ntBASIC5.19□□□□□ -1.58
CDH13P55290 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
CDH13P55290 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 OR6K3-202ENST00000368146 996 ntBASIC5.19□□□□□ -1.58
CDH13P55290 RNU6-31P-201ENST00000384388 108 ntBASIC5.19□□□□□ -1.58
CDH13P55290 RNA5SP122-201ENST00000384457 108 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AL133388.1-201ENST00000404509 287 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH13P55290 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH13P55290 TNPO1P1-201ENST00000423641 1138 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC002504.1-201ENST00000438281 691 ntBASIC5.19□□□□□ -1.58
CDH13P55290 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH13P55290 AC105399.1-202ENST00000447303 205 ntBASIC5.19□□□□□ -1.58
CDH13P55290 OR52E7P-201ENST00000452394 933 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC108161.1-201ENST00000461060 402 ntBASIC5.19□□□□□ -1.58
CDH13P55290 COX6B1P2-201ENST00000489624 230 ntBASIC5.19□□□□□ -1.58
CDH13P55290 AC069304.1-201ENST00000491593 704 ntBASIC5.19□□□□□ -1.58
CDH13P55290 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH13P55290 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms