Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 USP9YP2-201ENST00000504503 1000 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS2P54868 USP9YP1-201ENST00000513521 1002 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 RN7SKP276-201ENST00000516242 268 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 SEPT10P1-201ENST00000517342 1162 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS2P54868 AC011453.2-201ENST00000603737 729 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 AC083809.1-201ENST00000615051 472 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGCS2P54868 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 AL355834.1-201ENST00000556602 3965 ntBASIC5.8□□□□□ -1.48
HMGCS2P54868 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGCS2P54868 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGCS2P54868 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGCS2P54868 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 ATP5HP3-201ENST00000396994 486 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 RNU4-64P-201ENST00000410795 131 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 AC009480.2-201ENST00000422916 432 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 RPL7AP49-201ENST00000429522 581 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 AC009238.2-201ENST00000431026 355 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 AL591438.1-201ENST00000433508 581 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 AC099670.2-201ENST00000435130 321 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC090804.1-201ENST00000448870 490 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 TPT1P12-201ENST00000448968 492 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 RPL23AP56-201ENST00000460778 453 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 RN7SL385P-201ENST00000468873 276 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC098976.1-201ENST00000513014 541 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 OR5D2P-201ENST00000524390 911 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 GTF2IP11-201ENST00000526931 420 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC010928.1-201ENST00000592477 1447 ntBASIC5.79□□□□□ -1.48
HMGCS2P54868 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HMGCS2P54868 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGCS2P54868 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGCS2P54868 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS2P54868 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HMGCS2P54868 ZNF652P1-201ENST00000442420 1309 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 RPL32P3-201ENST00000359025 275 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HMGCS2P54868 MIR298-201ENST00000401212 88 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 RNU6-233P-201ENST00000410845 141 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 P2RY10P2-201ENST00000416730 913 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS2P54868 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS2P54868 OR2B7P-201ENST00000429302 934 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AL359265.2-201ENST00000434367 631 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 RPSAP41-201ENST00000439695 860 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS2P54868 SLC25A18P1-201ENST00000449385 454 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AC234781.3-201ENST00000452540 973 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AC091180.1-201ENST00000462104 372 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AC010326.1-201ENST00000462726 602 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AL672167.3-201ENST00000465951 960 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 RPL12P20-201ENST00000475538 479 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms