Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC012213.4-201ENST00000606457 354 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC015922.4-201ENST00000612568 690 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC015722.2-201ENST00000622210 551 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LIMK1P53667 MIR551A-201ENST00000385042 96 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 SNORA68.2-201ENST00000391263 128 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 DUTP5-201ENST00000406790 469 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC009302.1-201ENST00000417147 390 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.48□□□□□ -1.53
LIMK1P53667 RNF19BPX-201ENST00000426224 625 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC104837.2-201ENST00000427236 424 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC022022.1-201ENST00000430304 178 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC006335.2-201ENST00000437993 330 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC015983.1-201ENST00000441577 373 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 RPL10P17-201ENST00000453852 316 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 RPS3AP53-201ENST00000454716 778 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 NPM1P28-201ENST00000492269 840 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 RAB9BP1-201ENST00000519581 626 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 SNRPGP1-201ENST00000553864 222 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC019322.1-201ENST00000571869 389 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC234771.5-201ENST00000600161 514 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 AC015712.7-201ENST00000615211 635 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AP000346.3-201ENST00000622821 210 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 AC074101.1-201ENST00000637861 241 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.48□□□□□ -1.53
LIMK1P53667 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
LIMK1P53667 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LIMK1P53667 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIMK1P53667 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LIMK1P53667 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LIMK1P53667 AC083843.2-201ENST00000568248 6253 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
LIMK1P53667 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK1P53667 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.47□□□□□ -1.53
LIMK1P53667 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK1P53667 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK1P53667 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LIMK1P53667 RNVU1-6-201ENST00000364688 164 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 RNU1-43P-201ENST00000365052 165 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LIMK1P53667 RNU6-152P-201ENST00000384037 107 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK1P53667 MTCO1P45-201ENST00000431457 267 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 OR6D1P-201ENST00000436165 939 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 ARL5AP3-201ENST00000439327 386 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AL138878.2-201ENST00000440581 1241 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AC092647.3-201ENST00000443044 633 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 TXNP2-201ENST00000443918 295 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AL035551.1-201ENST00000446931 348 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AC105399.1-202ENST00000447303 205 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK1P53667 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.47□□□□□ -1.53
LIMK1P53667 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.47□□□□□ -1.53
LIMK1P53667 RN7SL385P-201ENST00000468873 276 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 RN7SL205P-201ENST00000490174 284 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 OR5AZ1P-201ENST00000527448 943 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 OR8X1P-201ENST00000534542 869 ntBASIC5.47□□□□□ -1.53
LIMK1P53667 AC092490.3-201ENST00000545370 572 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms