Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ADAD1P2-201ENST00000588476 646 ntBASIC5.19□□□□□ -1.58
PDX1P52945 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AC005972.3-201ENST00000606304 481 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MIR6820-201ENST00000611508 62 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC100827.5-201ENST00000615883 426 ntBASIC5.19□□□□□ -1.58
PDX1P52945 MIR6133-201ENST00000617057 108 ntBASIC5.19□□□□□ -1.58
PDX1P52945 AC106730.3-201ENST00000624568 641 ntBASIC5.19□□□□□ -1.58
PDX1P52945 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 AC006453.5-201ENST00000636451 619 ntBASIC5.19□□□□□ -1.58
PDX1P52945 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.19□□□□□ -1.58
PDX1P52945 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.19□□□□□ -1.58
PDX1P52945 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.19□□□□□ -1.58
PDX1P52945 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PDX1P52945 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.19□□□□□ -1.58
PDX1P52945 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.19□□□□□ -1.58
PDX1P52945 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDX1P52945 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 ICE2P1-201ENST00000512800 1849 ntBASIC5.18□□□□□ -1.58
PDX1P52945 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 AC018628.1-201ENST00000624147 3819 ntBASIC5.18□□□□□ -1.58
PDX1P52945 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDX1P52945 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 RN7SKP104-201ENST00000362605 328 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RNU4-4P-201ENST00000364588 130 ntBASIC5.18□□□□□ -1.58
PDX1P52945 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDX1P52945 U3.28-201ENST00000391249 210 ntBASIC5.18□□□□□ -1.58
PDX1P52945 CCNB2P1-201ENST00000399411 1150 ntBASIC5.18□□□□□ -1.58
PDX1P52945 UBE2V1P15-201ENST00000407776 448 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RNU2-72P-201ENST00000411175 163 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AL139128.1-201ENST00000413921 941 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 MTND4LP14-201ENST00000429447 288 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RBMY2QP-201ENST00000429799 1147 ntBASIC5.18□□□□□ -1.58
PDX1P52945 MED28P3-201ENST00000444288 531 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RPL31P20-201ENST00000449593 360 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.18□□□□□ -1.58
PDX1P52945 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.18□□□□□ -1.58
PDX1P52945 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.18□□□□□ -1.58
PDX1P52945 PCNAP1-201ENST00000505363 709 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RNA5SP228-201ENST00000516232 133 ntBASIC5.18□□□□□ -1.58
PDX1P52945 RNA5SP373-201ENST00000517271 95 ntBASIC5.18□□□□□ -1.58
PDX1P52945 OR5AM1P-201ENST00000532136 1032 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AP004607.2-201ENST00000533949 322 ntBASIC5.18□□□□□ -1.58
PDX1P52945 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.18□□□□□ -1.58
PDX1P52945 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDX1P52945 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 H3F3BP2-201ENST00000583907 357 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.18□□□□□ -1.58
PDX1P52945 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 AC040174.2-201ENST00000602701 465 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AC095055.1-201ENST00000603472 1113 ntBASIC5.18□□□□□ -1.58
PDX1P52945 HMGB1P51-201ENST00000605166 638 ntBASIC5.18□□□□□ -1.58
PDX1P52945 AC012213.4-201ENST00000606457 354 ntBASIC5.18□□□□□ -1.58
PDX1P52945 FAM25E-202ENST00000608562 189 ntBASIC5.18□□□□□ -1.58
PDX1P52945 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDX1P52945 AC109446.4-201ENST00000623235 2755 ntBASIC5.18□□□□□ -1.58
PDX1P52945 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDX1P52945 AC092451.3-201ENST00000625067 1343 ntBASIC5.18□□□□□ -1.58
PDX1P52945 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 AL360270.2-201ENST00000562952 5985 ntBASIC5.18□□□□□ -1.58
PDX1P52945 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.18□□□□□ -1.58
PDX1P52945 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.18□□□□□ -1.58
PDX1P52945 AL353796.1-201ENST00000561542 3241 ntBASIC5.18□□□□□ -1.58
PDX1P52945 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
PDX1P52945 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.17□□□□□ -1.58
PDX1P52945 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 RNU4-39P-201ENST00000362455 127 ntBASIC5.17□□□□□ -1.58
PDX1P52945 RN7SKP145-201ENST00000363291 303 ntBASIC5.17□□□□□ -1.58
PDX1P52945 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDX1P52945 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDX1P52945 SNORA70.6-201ENST00000383934 134 ntBASIC5.17□□□□□ -1.58
PDX1P52945 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDX1P52945 U3.23-201ENST00000391132 200 ntBASIC5.17□□□□□ -1.58
PDX1P52945 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDX1P52945 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AC093162.1-201ENST00000419682 124 ntBASIC5.17□□□□□ -1.58
PDX1P52945 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.17□□□□□ -1.58
PDX1P52945 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms