Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 PTP4A1P1-201ENST00000420539 515 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AL354766.1-201ENST00000423396 542 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 AC130360.1-201ENST00000425489 1117 ntBASIC5.08□□□□□ -1.6
SOX2P48431 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 EEF1A1P39-201ENST00000440791 250 ntBASIC5.08□□□□□ -1.6
SOX2P48431 RPL34P26-201ENST00000445636 354 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 RPS23P9-201ENST00000448848 438 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 RPS6P2-201ENST00000454208 705 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 RN7SL393P-201ENST00000463588 296 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AC074087.1-201ENST00000512059 724 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC118465.1-201ENST00000513820 1271 ntBASIC5.08□□□□□ -1.6
SOX2P48431 MRPS36P3-201ENST00000519284 130 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC130365.2-201ENST00000525882 1201 ntBASIC5.08□□□□□ -1.6
SOX2P48431 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AC023050.2-201ENST00000544968 387 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.08□□□□□ -1.6
SOX2P48431 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 AC061975.8-201ENST00000587058 721 ntBASIC5.08□□□□□ -1.6
SOX2P48431 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 AL049844.2-201ENST00000604280 628 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC011891.2-201ENST00000604949 397 ntBASIC5.08□□□□□ -1.6
SOX2P48431 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.08□□□□□ -1.6
SOX2P48431 U91328.4-201ENST00000608919 517 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC092681.3-201ENST00000609463 678 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC096586.1-201ENST00000610267 561 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
SOX2P48431 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SOX2P48431 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 LINC01613-201ENST00000561476 2780 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.07□□□□□ -1.6
SOX2P48431 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX2P48431 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 AC097063.1-201ENST00000426714 1797 ntBASIC5.07□□□□□ -1.6
SOX2P48431 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX2P48431 GNL2P1-201ENST00000451274 2190 ntBASIC5.07□□□□□ -1.6
SOX2P48431 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SOX2P48431 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
SOX2P48431 RN7SKP279-201ENST00000411383 298 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 BTF3P8-201ENST00000414577 526 ntBASIC5.07□□□□□ -1.6
SOX2P48431 RPS7P9-201ENST00000414704 586 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.07□□□□□ -1.6
SOX2P48431 AC246680.2-201ENST00000422106 389 ntBASIC5.07□□□□□ -1.6
SOX2P48431 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.07□□□□□ -1.6
SOX2P48431 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 RPS19P6-201ENST00000441327 433 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AL592437.1-201ENST00000443781 492 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 MED28P3-201ENST00000444288 531 ntBASIC5.07□□□□□ -1.6
SOX2P48431 HMGB3P6-201ENST00000444896 598 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC010240.2-201ENST00000445363 1205 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC023271.1-201ENST00000445936 1090 ntBASIC5.07□□□□□ -1.6
SOX2P48431 Z99714.1-201ENST00000450463 807 ntBASIC5.07□□□□□ -1.6
SOX2P48431 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.07□□□□□ -1.6
SOX2P48431 MEMO1P4-201ENST00000453590 386 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AL035407.2-201ENST00000454090 378 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC244505.3-201ENST00000454598 187 ntBASIC5.07□□□□□ -1.6
SOX2P48431 PSMC1P13-201ENST00000458195 985 ntBASIC5.07□□□□□ -1.6
SOX2P48431 RN7SL197P-201ENST00000466981 299 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC091544.1-201ENST00000484702 348 ntBASIC5.07□□□□□ -1.6
SOX2P48431 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.07□□□□□ -1.6
SOX2P48431 AC119751.1-201ENST00000513357 765 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 768.3 ms