Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC019050.1-201ENST00000418508 492 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 SEC63P1-201ENST00000425785 1258 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF4P48230 HSPE1P16-201ENST00000426640 348 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 DNAJC19P7-201ENST00000428811 344 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 MRPL50P1-201ENST00000431951 384 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF4P48230 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF4P48230 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 RPL32P14-201ENST00000463196 378 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF4P48230 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.25□□□□□ -1.41
TM4SF4P48230 OR7H2P-201ENST00000513483 306 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 MTATP6P9-201ENST00000515039 680 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 C1DP5-201ENST00000525775 383 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF4P48230 AL163952.1-202ENST00000569625 600 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AC136624.4-201ENST00000573044 370 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 AC005034.4-201ENST00000603612 899 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AC025175.1-201ENST00000606482 759 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 AP000240.1-201ENST00000609910 452 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 AL121950.1-201ENST00000624993 2077 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 AC020633.1-201ENST00000468439 2247 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 MTND5P11-201ENST00000511037 1812 ntBASIC6.25□□□□□ -1.41
TM4SF4P48230 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.24□□□□□ -1.41
TM4SF4P48230 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TM4SF4P48230 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 TMA16P2-201ENST00000413187 601 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 OR6K4P-201ENST00000423179 955 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF4P48230 BX119904.1-201ENST00000432026 348 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 RPL12P17-201ENST00000432393 498 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF4P48230 SETP6-201ENST00000479329 568 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 PPP1R11P1-201ENST00000486095 376 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF4P48230 IGKV2D-10-201ENST00000520194 281 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC009117.1-201ENST00000563948 554 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 BNIP3P39-201ENST00000601077 554 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AC026741.1-201ENST00000605892 482 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AC005156.1-201ENST00000613371 573 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
TM4SF4P48230 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF4P48230 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC232271.1-201ENST00000602455 2715 ntBASIC6.24□□□□□ -1.41
TM4SF4P48230 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
TM4SF4P48230 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF4P48230 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF4P48230 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF4P48230 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TM4SF4P48230 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 IRF5P1-201ENST00000504852 2164 ntBASIC6.23□□□□□ -1.41
TM4SF4P48230 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
TM4SF4P48230 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
TM4SF4P48230 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF4P48230 RN7SKP95-201ENST00000362860 303 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms