Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.81□□□□□ -1.64
RFC3P40938 AC024940.3-201ENST00000538551 316 ntBASIC4.81□□□□□ -1.64
RFC3P40938 OR1F2P-201ENST00000570470 933 ntBASIC4.81□□□□□ -1.64
RFC3P40938 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 AC133644.2-201ENST00000608142 540 ntBASIC4.81□□□□□ -1.64
RFC3P40938 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
RFC3P40938 AC090527.3-201ENST00000619041 548 ntBASIC4.81□□□□□ -1.64
RFC3P40938 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 LINC01739-205ENST00000641890 573 ntBASIC4.81□□□□□ -1.64
RFC3P40938 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.81□□□□□ -1.64
RFC3P40938 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 CASC19-281ENST00000642118 1554 ntBASIC4.81□□□□□ -1.64
RFC3P40938 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 AC131971.1-201ENST00000332881 1482 ntBASIC4.81□□□□□ -1.64
RFC3P40938 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
RFC3P40938 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFC3P40938 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC3P40938 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC3P40938 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC3P40938 ZNF652P1-201ENST00000442420 1309 ntBASIC4.8□□□□□ -1.64
RFC3P40938 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 AC083843.3-201ENST00000623679 2186 ntBASIC4.8□□□□□ -1.64
RFC3P40938 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFC3P40938 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RFC3P40938 RN7SKP125-201ENST00000410481 302 ntBASIC4.8□□□□□ -1.64
RFC3P40938 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.8□□□□□ -1.64
RFC3P40938 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 RBMY2QP-201ENST00000429799 1147 ntBASIC4.8□□□□□ -1.64
RFC3P40938 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 NPM1P33-201ENST00000438918 872 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC3P40938 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.8□□□□□ -1.64
RFC3P40938 AC017007.3-201ENST00000479865 435 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AC093827.1-201ENST00000480094 861 ntBASIC4.8□□□□□ -1.64
RFC3P40938 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 GTF2F2P1-201ENST00000511083 675 ntBASIC4.8□□□□□ -1.64
RFC3P40938 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.8□□□□□ -1.64
RFC3P40938 SCARNA20.4-201ENST00000516969 131 ntBASIC4.8□□□□□ -1.64
RFC3P40938 RN7SKP147-201ENST00000517154 244 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 AC134349.2-201ENST00000535136 910 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AC092490.3-201ENST00000545370 572 ntBASIC4.8□□□□□ -1.64
RFC3P40938 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.8□□□□□ -1.64
RFC3P40938 AC095055.1-201ENST00000603472 1113 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AC005252.1-201ENST00000604518 1063 ntBASIC4.8□□□□□ -1.64
RFC3P40938 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
RFC3P40938 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
RFC3P40938 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFC3P40938 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
RFC3P40938 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
RFC3P40938 ADAM5-202ENST00000399789 1942 ntBASIC4.8□□□□□ -1.64
RFC3P40938 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 AC092747.4-201ENST00000620519 1861 ntBASIC4.79□□□□□ -1.64
RFC3P40938 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 AC092681.1-201ENST00000297369 291 ntBASIC4.79□□□□□ -1.64
RFC3P40938 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFC3P40938 MIR585-201ENST00000384887 94 ntBASIC4.79□□□□□ -1.64
RFC3P40938 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFC3P40938 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RFC3P40938 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.79□□□□□ -1.64
RFC3P40938 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 AC010740.1-201ENST00000417035 684 ntBASIC4.79□□□□□ -1.64
RFC3P40938 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
RFC3P40938 PA2G4P6-201ENST00000438325 1197 ntBASIC4.79□□□□□ -1.64
RFC3P40938 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.79□□□□□ -1.64
RFC3P40938 RNA5SP103-201ENST00000459503 118 ntBASIC4.79□□□□□ -1.64
RFC3P40938 AP000942.1-201ENST00000463969 747 ntBASIC4.79□□□□□ -1.64
RFC3P40938 PSAT1P4-201ENST00000466500 526 ntBASIC4.79□□□□□ -1.64
RFC3P40938 AC004980.4-201ENST00000513375 203 ntBASIC4.79□□□□□ -1.64
RFC3P40938 RFPL4AP3-201ENST00000515267 345 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms