Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.2□□□□□ -1.58
FDFT1P37268 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.2□□□□□ -1.58
FDFT1P37268 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AP002371.1-201ENST00000463604 433 ntBASIC5.2□□□□□ -1.58
FDFT1P37268 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.2□□□□□ -1.58
FDFT1P37268 RPL7P39-201ENST00000481157 744 ntBASIC5.2□□□□□ -1.58
FDFT1P37268 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.2□□□□□ -1.58
FDFT1P37268 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
FDFT1P37268 MTND2P17-201ENST00000550281 688 ntBASIC5.2□□□□□ -1.58
FDFT1P37268 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.2□□□□□ -1.58
FDFT1P37268 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.2□□□□□ -1.58
FDFT1P37268 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.2□□□□□ -1.58
FDFT1P37268 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.2□□□□□ -1.58
FDFT1P37268 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 STX3-208ENST00000641815 3236 ntBASIC5.2□□□□□ -1.58
FDFT1P37268 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
FDFT1P37268 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
FDFT1P37268 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.19□□□□□ -1.58
FDFT1P37268 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
FDFT1P37268 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.19□□□□□ -1.58
FDFT1P37268 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.19□□□□□ -1.58
FDFT1P37268 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 AL359643.1-201ENST00000404109 423 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 OR3A2-201ENST00000408891 1076 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 RN7SKP59-201ENST00000410520 314 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.19□□□□□ -1.58
FDFT1P37268 AL121776.1-201ENST00000429337 372 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 AC002069.1-201ENST00000429649 1159 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 SIAH1P1-201ENST00000479411 923 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 TRBV8-1-201ENST00000481590 279 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
FDFT1P37268 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.19□□□□□ -1.58
FDFT1P37268 RNA5SP362-201ENST00000516048 118 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.19□□□□□ -1.58
FDFT1P37268 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.19□□□□□ -1.58
FDFT1P37268 AGGF1P9-201ENST00000561884 913 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.19□□□□□ -1.58
FDFT1P37268 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.19□□□□□ -1.58
FDFT1P37268 CASC19-264ENST00000641912 1184 ntBASIC5.19□□□□□ -1.58
FDFT1P37268 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
FDFT1P37268 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FDFT1P37268 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 MIPEPP2-201ENST00000422560 1819 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
FDFT1P37268 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.18□□□□□ -1.58
FDFT1P37268 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 AC098583.1-201ENST00000480875 255 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 AC016687.1-201ENST00000482574 353 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 RPL7P51-201ENST00000490532 749 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 RPL23AP53-201ENST00000521854 457 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.18□□□□□ -1.58
FDFT1P37268 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 AC116553.2-201ENST00000564203 463 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 AC095055.1-201ENST00000603472 1113 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 AC087468.1-201ENST00000604365 630 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FDFT1P37268 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
FDFT1P37268 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.18□□□□□ -1.58
FDFT1P37268 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 MTCO1P15-201ENST00000529569 1526 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 PANDAR-201ENST00000629595 1506 ntBASIC5.18□□□□□ -1.58
FDFT1P37268 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FDFT1P37268 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FDFT1P37268 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
FDFT1P37268 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.17□□□□□ -1.58
FDFT1P37268 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms