Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM23P36406 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM23P36406 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 U3.3-201ENST00000362986 216 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 MIR137-201ENST00000385223 102 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 RN7SKP213-201ENST00000410746 298 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AL133482.1-201ENST00000415988 498 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM23P36406 RPS4XP16-201ENST00000427198 791 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM23P36406 AC124944.2-201ENST00000429866 1242 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 TMX2P1-201ENST00000436507 708 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AL359265.1-201ENST00000440296 795 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 RN7SL329P-201ENST00000467740 299 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 CBX1P5-201ENST00000475330 559 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 RPS18P6-201ENST00000476880 458 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 RPSAP50-201ENST00000481955 852 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AC004453.1-201ENST00000487895 408 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 RPS24P16-201ENST00000497294 392 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 GTF2F2P1-201ENST00000511083 675 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 CCNHP1-201ENST00000513311 678 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 NPM1P52-201ENST00000518264 846 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM23P36406 AC022360.1-201ENST00000521058 340 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 AL021707.7-201ENST00000607991 416 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 AC099494.2-201ENST00000623371 978 ntBASIC5.22□□□□□ -1.57
TRIM23P36406 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TRIM23P36406 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
TRIM23P36406 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM23P36406 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM23P36406 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM23P36406 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TRIM23P36406 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM23P36406 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM23P36406 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM23P36406 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM23P36406 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 RNA5SP305-201ENST00000362665 119 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 RN7SKP145-201ENST00000363291 303 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM23P36406 RNU1-106P-201ENST00000384382 164 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 MIR1182-201ENST00000408363 97 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 AC007394.1-201ENST00000421941 531 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 RFESDP1-201ENST00000422350 461 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM23P36406 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 RPL7L1P1-201ENST00000448259 785 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM23P36406 AC239798.3-201ENST00000454459 408 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC009127.1-201ENST00000467090 155 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM23P36406 NPM1P29-201ENST00000483112 803 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC109462.1-201ENST00000491087 368 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC012400.1-201ENST00000518452 381 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM23P36406 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM23P36406 LSM3P2-201ENST00000551246 273 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TRIM23P36406 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 MIR3691-201ENST00000578066 90 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM23P36406 AC007786.3-201ENST00000615154 596 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 MIR6133-201ENST00000617057 108 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 AC068870.2-201ENST00000620635 389 ntBASIC5.21□□□□□ -1.58
TRIM23P36406 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms