Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 NCLP2-201ENST00000416078 1462 ntBASIC5.98□□□□□ -1.45
SCN4AP35499 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SCN4AP35499 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCN4AP35499 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.98□□□□□ -1.45
SCN4AP35499 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCN4AP35499 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC017079.1-201ENST00000333650 415 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 RN7SKP145-201ENST00000363291 303 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC073465.2-201ENST00000440938 498 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC108751.3-201ENST00000461814 1020 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCN4AP35499 RPS24P16-201ENST00000497294 392 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC097486.1-201ENST00000515331 210 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 OR8G5-201ENST00000524943 1041 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC015799.1-201ENST00000622996 3122 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC016745.2-201ENST00000608834 3443 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 SNORA2.3-201ENST00000383920 135 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AL050305.1-201ENST00000399993 1230 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC009506.2-201ENST00000420635 840 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 AL354766.1-201ENST00000423396 542 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 TDGF1P1-201ENST00000445734 527 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.97□□□□□ -1.45
SCN4AP35499 CR383656.1-201ENST00000484916 377 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.97□□□□□ -1.45
SCN4AP35499 AL121890.3-201ENST00000618494 516 ntBASIC5.97□□□□□ -1.45
SCN4AP35499 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.97□□□□□ -1.45
SCN4AP35499 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCN4AP35499 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SCN4AP35499 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SCN4AP35499 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SCN4AP35499 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SCN4AP35499 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.96□□□□□ -1.46
SCN4AP35499 U3.10-201ENST00000364459 214 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 RNU1-64P-201ENST00000365443 163 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 SNORA37-201ENST00000384504 129 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SCN4AP35499 NPM1P6-201ENST00000521088 871 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN4AP35499 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC008782.1-201ENST00000603386 430 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 AC079298.1-201ENST00000625026 1619 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SCN4AP35499 AC003973.3-201ENST00000624863 2822 ntBASIC5.96□□□□□ -1.46
SCN4AP35499 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SCN4AP35499 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SCN4AP35499 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SCN4AP35499 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms