Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC008115.3-201ENST00000614874 549 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 CU639417.4-201ENST00000623928 207 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AC007683.2-201ENST00000624681 714 ntBASIC5.6□□□□□ -1.51
CTNNA1P35221 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.6□□□□□ -1.51
CTNNA1P35221 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
CTNNA1P35221 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CTNNA1P35221 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CTNNA1P35221 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 RN7SKP153-201ENST00000365026 316 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 SNORA68.2-201ENST00000391263 128 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 HMGN1P20-201ENST00000411849 300 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 RPL26P37-201ENST00000411983 438 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 NPM1P40-201ENST00000412758 733 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 EEF1B2P8-201ENST00000414101 671 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 RPS26P13-201ENST00000419030 330 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AL590609.2-201ENST00000421430 368 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AL606490.7-201ENST00000433136 191 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AL353898.1-201ENST00000444055 238 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 DNAJB5P1-201ENST00000454004 806 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 RN7SL168P-201ENST00000463821 279 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 RPL5P22-201ENST00000480199 884 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC058823.1-201ENST00000485315 474 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 RFPL4AP5-201ENST00000514977 504 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 SCARNA16.4-201ENST00000516956 187 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 OR8A2P-201ENST00000528631 952 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC078878.1-201ENST00000539832 958 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.59□□□□□ -1.51
CTNNA1P35221 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC022884.2-201ENST00000578535 580 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC027243.2-201ENST00000602530 724 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AC006363.1-201ENST00000603806 463 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AL096712.1-201ENST00000614561 159 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 MIR6071-201ENST00000616741 78 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC005332.5-201ENST00000591222 2919 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.59□□□□□ -1.51
CTNNA1P35221 AC008079.2-201ENST00000623543 20396 ntBASIC5.59□□□□□ -1.51
CTNNA1P35221 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CTNNA1P35221 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CTNNA1P35221 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CTNNA1P35221 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.59□□□□□ -1.52
CTNNA1P35221 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA1P35221 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CTNNA1P35221 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.58□□□□□ -1.52
CTNNA1P35221 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA1P35221 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTNNA1P35221 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA1P35221 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 MIR421-201ENST00000365696 85 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CTNNA1P35221 AC093719.1-202ENST00000392735 373 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 AMZ2P2-201ENST00000406819 1057 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 OR2AT2P-201ENST00000413438 905 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 SLC20A1P1-201ENST00000413906 956 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CTNNA1P35221 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 GSTM5P1-201ENST00000434751 660 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.58□□□□□ -1.52
CTNNA1P35221 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.58□□□□□ -1.52
CTNNA1P35221 RPL7AP52-201ENST00000458096 790 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 AC079168.1-201ENST00000458741 345 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 RPL7P41-201ENST00000485823 957 ntBASIC5.58□□□□□ -1.52
CTNNA1P35221 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.58□□□□□ -1.52
CTNNA1P35221 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms