Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC023050.2-201ENST00000544968 387 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC125611.1-201ENST00000549563 229 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC6A4P31645 HSPE1P2-201ENST00000554777 306 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC6A4P31645 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 AGGF1P6-201ENST00000569213 976 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC6A4P31645 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.92□□□□□ -1.46
SLC6A4P31645 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.92□□□□□ -1.46
SLC6A4P31645 AC069304.3-201ENST00000603938 1084 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC6A4P31645 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.92□□□□□ -1.46
SLC6A4P31645 AL352984.2-201ENST00000611153 546 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC6A4P31645 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 AL352984.2-202ENST00000613699 155 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AL138960.1-201ENST00000613838 513 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC091304.6-201ENST00000619761 202 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SLC6A4P31645 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SLC6A4P31645 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SLC6A4P31645 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC6A4P31645 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 AC117409.1-201ENST00000470499 1310 ntBASIC5.92□□□□□ -1.46
SLC6A4P31645 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.92□□□□□ -1.46
SLC6A4P31645 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.92□□□□□ -1.46
SLC6A4P31645 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SLC6A4P31645 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC027279.4-201ENST00000624371 2072 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SLC6A4P31645 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SLC6A4P31645 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 RNU6-1005P-201ENST00000384519 107 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SLC6A4P31645 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AL596448.1-201ENST00000415024 392 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 BMS1P17-202ENST00000416720 316 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 NME1P1-201ENST00000420914 382 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC079355.1-201ENST00000421770 223 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC084290.1-201ENST00000434995 374 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.91□□□□□ -1.46
SLC6A4P31645 OR7E116P-201ENST00000448529 957 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 RN7SL570P-201ENST00000484405 292 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.91□□□□□ -1.46
SLC6A4P31645 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC074087.1-201ENST00000512059 724 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC108120.2-201ENST00000512973 294 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 TMEM97P2-201ENST00000517841 403 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 AL121594.2-201ENST00000541658 472 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC090022.1-201ENST00000546569 311 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC008088.1-201ENST00000580993 280 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 MIR4420-201ENST00000583944 77 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AP002906.1-201ENST00000603405 233 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC025175.1-201ENST00000606482 759 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC078883.4-201ENST00000623218 367 ntBASIC5.91□□□□□ -1.46
SLC6A4P31645 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.91□□□□□ -1.46
SLC6A4P31645 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
SLC6A4P31645 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SLC6A4P31645 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms