Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR134-201ENST00000385258 73 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
COL5A1P20908 SNORA48.4-201ENST00000391089 134 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC004074.1-201ENST00000421810 1063 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 RPS29P9-201ENST00000440360 171 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 BX842559.2-201ENST00000451418 605 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 RN7SL319P-201ENST00000480656 221 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 AC022133.1-201ENST00000490961 571 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 RN7SL244P-201ENST00000493405 297 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.85□□□□□ -1.63
COL5A1P20908 AP001880.2-201ENST00000538233 448 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL5A1P20908 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC011626.1-201ENST00000604710 562 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 AL445423.1-201ENST00000609941 536 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
COL5A1P20908 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.85□□□□□ -1.63
COL5A1P20908 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 AL031123.3-201ENST00000623345 1837 ntBASIC4.85□□□□□ -1.63
COL5A1P20908 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL5A1P20908 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.85□□□□□ -1.63
COL5A1P20908 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A1P20908 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A1P20908 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
COL5A1P20908 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A1P20908 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 AL590240.1-201ENST00000334118 313 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 SNORA70F-201ENST00000384142 135 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 ADAM24P-201ENST00000398655 2101 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 AL389915.1-201ENST00000422463 466 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL5A1P20908 CDC27P1-201ENST00000445384 715 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.84□□□□□ -1.63
COL5A1P20908 IGBP1P4-201ENST00000503202 879 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.84□□□□□ -1.63
COL5A1P20908 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.84□□□□□ -1.63
COL5A1P20908 AP003080.1-202ENST00000526526 915 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 AC027369.5-201ENST00000533838 755 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.84□□□□□ -1.63
COL5A1P20908 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
COL5A1P20908 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A1P20908 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL5A1P20908 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.84□□□□□ -1.63
COL5A1P20908 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
COL5A1P20908 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL5A1P20908 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL5A1P20908 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
COL5A1P20908 KARSP3-201ENST00000571212 1504 ntBASIC4.84□□□□□ -1.64
COL5A1P20908 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.84□□□□□ -1.64
COL5A1P20908 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 AL049697.2-201ENST00000403708 294 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 RN7SKP16-201ENST00000410180 299 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A1P20908 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.83□□□□□ -1.64
COL5A1P20908 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.83□□□□□ -1.64
COL5A1P20908 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.83□□□□□ -1.64
COL5A1P20908 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.83□□□□□ -1.64
COL5A1P20908 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 AC128716.1-201ENST00000475129 166 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AC093827.1-201ENST00000480094 861 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A1P20908 RPL21P129-201ENST00000491732 478 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A1P20908 AC083829.1-201ENST00000503756 657 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AC098976.1-201ENST00000513014 541 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 RNA5SP392-201ENST00000516905 112 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.83□□□□□ -1.64
COL5A1P20908 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
COL5A1P20908 EIF1P5-201ENST00000585002 234 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AP005432.1-201ENST00000580891 3485 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 ZNF652P1-201ENST00000442420 1309 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL5A1P20908 AL592148.3-201ENST00000608771 2646 ntBASIC4.83□□□□□ -1.64
COL5A1P20908 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL5A1P20908 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.83□□□□□ -1.64
COL5A1P20908 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
COL5A1P20908 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL5A1P20908 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms