Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TOP1P11387 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
TOP1P11387 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TOP1P11387 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
TOP1P11387 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6□□□□□ -1.45
TOP1P11387 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 AC104623.2-202ENST00000623477 4002 ntBASIC6□□□□□ -1.45
TOP1P11387 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
TOP1P11387 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6□□□□□ -1.45
TOP1P11387 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 OR9K1P-202ENST00000641111 3217 ntBASIC6□□□□□ -1.45
TOP1P11387 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6□□□□□ -1.45
TOP1P11387 CHMP1B2P-201ENST00000399581 597 ntBASIC6□□□□□ -1.45
TOP1P11387 AL078599.1-201ENST00000402075 293 ntBASIC6□□□□□ -1.45
TOP1P11387 AL589647.1-201ENST00000402485 466 ntBASIC6□□□□□ -1.45
TOP1P11387 RNU2-22P-201ENST00000411266 212 ntBASIC6□□□□□ -1.45
TOP1P11387 COX5BP7-201ENST00000414780 274 ntBASIC6□□□□□ -1.45
TOP1P11387 AC006455.6-201ENST00000426192 893 ntBASIC6□□□□□ -1.45
TOP1P11387 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6□□□□□ -1.45
TOP1P11387 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6□□□□□ -1.45
TOP1P11387 NDUFA5P8-201ENST00000449019 346 ntBASIC6□□□□□ -1.45
TOP1P11387 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6□□□□□ -1.45
TOP1P11387 GAPDHP14-201ENST00000450472 937 ntBASIC6□□□□□ -1.45
TOP1P11387 BX842559.2-201ENST00000451418 605 ntBASIC6□□□□□ -1.45
TOP1P11387 AC027369.5-201ENST00000533838 755 ntBASIC6□□□□□ -1.45
TOP1P11387 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6□□□□□ -1.45
TOP1P11387 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6□□□□□ -1.45
TOP1P11387 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6□□□□□ -1.45
TOP1P11387 AC040958.1-201ENST00000561102 201 ntBASIC6□□□□□ -1.45
TOP1P11387 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6□□□□□ -1.45
TOP1P11387 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 AC009852.2-201ENST00000567898 485 ntBASIC6□□□□□ -1.45
TOP1P11387 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6□□□□□ -1.45
TOP1P11387 MIR4646-201ENST00000580775 63 ntBASIC6□□□□□ -1.45
TOP1P11387 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6□□□□□ -1.45
TOP1P11387 AC133644.2-201ENST00000608142 540 ntBASIC6□□□□□ -1.45
TOP1P11387 TRIM51GP-201ENST00000534741 1350 ntBASIC6□□□□□ -1.45
TOP1P11387 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TOP1P11387 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TOP1P11387 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP1P11387 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TOP1P11387 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP1P11387 AC003985.2-201ENST00000562268 1669 ntBASIC5.99□□□□□ -1.45
TOP1P11387 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AL645733.1-201ENST00000402250 217 ntBASIC5.99□□□□□ -1.45
TOP1P11387 RPL21P67-201ENST00000402896 478 ntBASIC5.99□□□□□ -1.45
TOP1P11387 SNORA11B-201ENST00000408175 129 ntBASIC5.99□□□□□ -1.45
TOP1P11387 RPL12P9-201ENST00000412942 488 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.99□□□□□ -1.45
TOP1P11387 GJA6P-201ENST00000415117 1042 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AC234781.4-201ENST00000419384 244 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP1P11387 AC009238.2-201ENST00000431026 355 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AC245028.2-201ENST00000458673 253 ntBASIC5.99□□□□□ -1.45
TOP1P11387 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AC110775.1-201ENST00000513721 462 ntBASIC5.99□□□□□ -1.45
TOP1P11387 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.99□□□□□ -1.45
TOP1P11387 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.99□□□□□ -1.45
TOP1P11387 AC010547.7-201ENST00000570323 333 ntBASIC5.99□□□□□ -1.45
TOP1P11387 BNIP3P35-201ENST00000604530 490 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL627230.1-201ENST00000613077 211 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL591926.8-201ENST00000616876 211 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.99□□□□□ -1.45
TOP1P11387 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.99□□□□□ -1.45
TOP1P11387 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.99□□□□□ -1.45
TOP1P11387 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TOP1P11387 Z95331.1-201ENST00000623075 23112 ntBASIC5.99□□□□□ -1.45
TOP1P11387 AC022417.1-201ENST00000624768 1303 ntBASIC5.99□□□□□ -1.45
TOP1P11387 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.98□□□□□ -1.45
TOP1P11387 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP1P11387 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.98□□□□□ -1.45
TOP1P11387 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms