Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CSB-PGBD3P0DP91 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC073055.1-201ENST00000456901 1621 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC007993.1-201ENST00000621298 2430 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 RNA5SP156-201ENST00000410250 110 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 Z93019.1-201ENST00000416450 973 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 OR4K6P-201ENST00000416478 897 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 OR5W1P-201ENST00000423705 938 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 BRWD1P3-201ENST00000428816 390 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC092170.1-201ENST00000440211 356 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 DNAJC19P5-201ENST00000443295 316 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AURKAPS1-201ENST00000451805 1212 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 RPL9P33-201ENST00000484311 566 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC091965.3-201ENST00000506236 208 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC090958.1-201ENST00000511122 351 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC112191.2-201ENST00000522428 333 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 OR5AK3P-201ENST00000527486 1297 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC090022.1-201ENST00000546569 311 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 BLZF2P-201ENST00000553776 1130 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 ANP32BP3-201ENST00000559213 706 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC136619.2-201ENST00000563361 631 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC090236.2-201ENST00000587933 1101 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL592221.1-201ENST00000605266 382 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC139769.3-201ENST00000618383 175 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 OR1N1-202ENST00000619659 939 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC109454.4-201ENST00000623411 649 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL049767.1-202ENST00000637826 242 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 AL158152.1-201ENST00000602652 1435 ntBASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CSB-PGBD3P0DP91 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 DMD-228ENST00000541735 7080 ntTSL 5 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 RNU6-353P-201ENST00000364266 108 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 Y_RNA.303-201ENST00000364998 94 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 RNU4-31P-201ENST00000384211 141 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 AL049610.1-201ENST00000423374 372 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 CENPIP1-201ENST00000425713 902 ntBASIC8.36□□□□□ -1.07
CSB-PGBD3P0DP91 IPMKP1-201ENST00000425988 855 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms