Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 COX6B1P1-201ENST00000415962 213 ntBASIC5.81□□□□□ -1.48
MMP3P08254 MTND2P15-201ENST00000418575 892 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AL445528.1-201ENST00000426330 420 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AL392003.1-201ENST00000434394 243 ntBASIC5.81□□□□□ -1.48
MMP3P08254 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.81□□□□□ -1.48
MMP3P08254 MRPS33P4-201ENST00000434892 317 ntBASIC5.81□□□□□ -1.48
MMP3P08254 RPL34P20-201ENST00000442771 351 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 IGLV2-34-201ENST00000490007 283 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.81□□□□□ -1.48
MMP3P08254 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 AC006427.1-201ENST00000514359 712 ntBASIC5.81□□□□□ -1.48
MMP3P08254 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AP003080.1-202ENST00000526526 915 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AC079064.1-201ENST00000528365 362 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.81□□□□□ -1.48
MMP3P08254 CR383656.14-201ENST00000551951 406 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.81□□□□□ -1.48
MMP3P08254 AC011487.3-201ENST00000593607 453 ntBASIC5.81□□□□□ -1.48
MMP3P08254 AL162431.4-201ENST00000604674 411 ntBASIC5.81□□□□□ -1.48
MMP3P08254 LINC00216-201ENST00000623548 1126 ntBASIC5.81□□□□□ -1.48
MMP3P08254 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.81□□□□□ -1.48
MMP3P08254 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.81□□□□□ -1.48
MMP3P08254 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.81□□□□□ -1.48
MMP3P08254 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.81□□□□□ -1.48
MMP3P08254 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
MMP3P08254 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
MMP3P08254 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.8□□□□□ -1.48
MMP3P08254 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 AC120036.2-201ENST00000509729 1474 ntBASIC5.8□□□□□ -1.48
MMP3P08254 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
MMP3P08254 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.8□□□□□ -1.48
MMP3P08254 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 OR2AM1P-201ENST00000422137 422 ntBASIC5.8□□□□□ -1.48
MMP3P08254 MTND4LP14-201ENST00000429447 288 ntBASIC5.8□□□□□ -1.48
MMP3P08254 UBE2V1P6-201ENST00000430840 422 ntBASIC5.8□□□□□ -1.48
MMP3P08254 HSFY7P-201ENST00000432672 318 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.8□□□□□ -1.48
MMP3P08254 HSFY8P-201ENST00000437934 318 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AC074367.1-201ENST00000438685 1125 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 HSFY5P-201ENST00000453726 309 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.8□□□□□ -1.48
MMP3P08254 RPS29P22-201ENST00000472363 168 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.8□□□□□ -1.48
MMP3P08254 RPL7P16-201ENST00000479738 738 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.8□□□□□ -1.48
MMP3P08254 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.8□□□□□ -1.48
MMP3P08254 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 AC008033.2-201ENST00000542626 177 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 ELOCP28-201ENST00000590044 317 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AC108738.1-201ENST00000603703 237 ntBASIC5.8□□□□□ -1.48
MMP3P08254 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.8□□□□□ -1.48
MMP3P08254 AC006249.1-201ENST00000621223 471 ntBASIC5.8□□□□□ -1.48
MMP3P08254 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 AC119674.1-220ENST00000641502 1048 ntBASIC5.8□□□□□ -1.48
MMP3P08254 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
MMP3P08254 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 BCORP1-203ENST00000513194 5093 ntBASIC5.8□□□□□ -1.48
MMP3P08254 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MMP3P08254 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.8□□□□□ -1.48
MMP3P08254 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MMP3P08254 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.79□□□□□ -1.48
MMP3P08254 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.79□□□□□ -1.48
MMP3P08254 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MMP3P08254 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms