Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.87□□□□□ -1.63
MT-ND1P03886 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.87□□□□□ -1.63
MT-ND1P03886 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.87□□□□□ -1.63
MT-ND1P03886 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 RNU6-386P-201ENST00000362650 107 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 RNU4-7P-201ENST00000364758 141 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AL078599.1-201ENST00000402075 293 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC013429.2-201ENST00000418798 781 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 RPL24P2-201ENST00000421023 475 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 RPS3P2-201ENST00000421346 701 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 TNPO1P1-201ENST00000423641 1138 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.87□□□□□ -1.63
MT-ND1P03886 BTF3P6-201ENST00000448054 499 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC002553.2-201ENST00000453217 340 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 NDUFA5P5-201ENST00000468361 342 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC094085.1-201ENST00000468914 584 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 RN7SL423P-201ENST00000486202 304 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.87□□□□□ -1.63
MT-ND1P03886 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC005341.1-201ENST00000571086 708 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC027281.1-201ENST00000574178 758 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC005726.4-201ENST00000582858 458 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 NPM1P45-201ENST00000583151 559 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC027243.2-201ENST00000602530 724 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC239803.2-201ENST00000610161 430 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC108359.1-201ENST00000616451 1211 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AL122125.1-201ENST00000616999 600 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 AC015914.2-201ENST00000618167 288 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.87□□□□□ -1.63
MT-ND1P03886 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
MT-ND1P03886 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
MT-ND1P03886 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
MT-ND1P03886 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
MT-ND1P03886 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.86□□□□□ -1.63
MT-ND1P03886 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 AC005294.1-201ENST00000355509 281 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 UBBP2-201ENST00000376781 231 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 HSPA8P15-201ENST00000401676 786 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AL390316.1-201ENST00000406279 553 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 HSPE1P16-201ENST00000426640 348 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AC105399.1-202ENST00000447303 205 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 BX842559.2-201ENST00000451418 605 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AL133244.1-201ENST00000456007 258 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC007998.1-201ENST00000474156 672 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.86□□□□□ -1.63
MT-ND1P03886 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC011411.1-201ENST00000509592 876 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 MTND2P31-201ENST00000512602 616 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 SNORD46.2-201ENST00000516021 102 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC105031.1-201ENST00000518550 476 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 MIR4505-201ENST00000582238 73 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 BNIP3P35-201ENST00000604530 490 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC009597.2-201ENST00000604659 592 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 GMCL1P2-201ENST00000605230 823 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC007620.3-201ENST00000608131 497 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.86□□□□□ -1.63
MT-ND1P03886 AP001962.1-201ENST00000624114 559 ntBASIC4.86□□□□□ -1.63
MT-ND1P03886 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
MT-ND1P03886 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms