Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 UGT2B26P-201ENST00000508672 1613 ntBASIC5.02□□□□□ -1.61
SSX4O60224 OR13C1P-202ENST00000641378 2919 ntBASIC5.02□□□□□ -1.61
SSX4O60224 RAD1P1-201ENST00000231383 813 ntBASIC5.02□□□□□ -1.61
SSX4O60224 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX4O60224 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 RNU1-136P-201ENST00000384181 164 ntBASIC5.02□□□□□ -1.61
SSX4O60224 RNU6-729P-201ENST00000384399 107 ntBASIC5.02□□□□□ -1.61
SSX4O60224 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SSX4O60224 AL391361.1-201ENST00000405580 489 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 Z93019.1-201ENST00000416450 973 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 AK4P4-201ENST00000419465 646 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 RPL23AP4-201ENST00000427757 463 ntBASIC5.02□□□□□ -1.61
SSX4O60224 BRWD1P3-201ENST00000428816 390 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX4O60224 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX4O60224 AC099521.1-201ENST00000482557 334 ntBASIC5.02□□□□□ -1.61
SSX4O60224 COX6B1P2-201ENST00000489624 230 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 AC093763.2-201ENST00000505334 1223 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 RNU6-513P-201ENST00000516104 104 ntBASIC5.02□□□□□ -1.61
SSX4O60224 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 AL121594.2-201ENST00000541658 472 ntBASIC5.02□□□□□ -1.61
SSX4O60224 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX4O60224 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX4O60224 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 AL163952.1-202ENST00000569625 600 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.02□□□□□ -1.61
SSX4O60224 MIR4505-201ENST00000582238 73 ntBASIC5.02□□□□□ -1.61
SSX4O60224 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 AC119501.1-201ENST00000603646 475 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.02□□□□□ -1.61
SSX4O60224 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 AC003973.3-201ENST00000624863 2822 ntBASIC5.02□□□□□ -1.61
SSX4O60224 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSX4O60224 AL353796.1-201ENST00000561542 3241 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC025574.1-201ENST00000554784 1653 ntBASIC5.02□□□□□ -1.61
SSX4O60224 CR788268.1-201ENST00000603931 1809 ntBASIC5.02□□□□□ -1.61
SSX4O60224 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.02□□□□□ -1.61
SSX4O60224 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.02□□□□□ -1.61
SSX4O60224 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 FBXL21-201ENST00000297158 1305 ntBASIC5.01□□□□□ -1.61
SSX4O60224 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 AC019072.1-201ENST00000604535 1551 ntBASIC5.01□□□□□ -1.61
SSX4O60224 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SSX4O60224 RNU6-792P-201ENST00000363490 107 ntBASIC5.01□□□□□ -1.61
SSX4O60224 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
SSX4O60224 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 HMGB1P20-201ENST00000402555 677 ntBASIC5.01□□□□□ -1.61
SSX4O60224 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSX4O60224 RN7SKP278-201ENST00000410504 342 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 AC093155.2-201ENST00000420734 937 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 NDUFB4P8-201ENST00000435351 367 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC096775.1-201ENST00000437724 448 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC002504.1-201ENST00000438281 691 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.01□□□□□ -1.61
SSX4O60224 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.01□□□□□ -1.61
SSX4O60224 MYO5BP2-201ENST00000449815 1277 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC245028.2-201ENST00000458673 253 ntBASIC5.01□□□□□ -1.61
SSX4O60224 AC107015.1-201ENST00000466902 747 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms