Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 MORF4L1P5-201ENST00000433352 961 ntBASIC6.98□□□□□ -1.29
SOX1O00570 TMX2P1-201ENST00000436507 708 ntBASIC6.98□□□□□ -1.29
SOX1O00570 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 PAXBP1P1-201ENST00000449315 447 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC079776.3-201ENST00000450665 370 ntBASIC6.98□□□□□ -1.29
SOX1O00570 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 USP9YP34-201ENST00000453983 808 ntBASIC6.98□□□□□ -1.29
SOX1O00570 MTCO3P11-201ENST00000455103 774 ntBASIC6.98□□□□□ -1.29
SOX1O00570 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 DUTP7-201ENST00000507982 486 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 OR51A1P-201ENST00000511110 946 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC108120.2-201ENST00000512973 294 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AL671862.1-201ENST00000515851 349 ntBASIC6.98□□□□□ -1.29
SOX1O00570 RNA5SP228-201ENST00000516232 133 ntBASIC6.98□□□□□ -1.29
SOX1O00570 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 OR5AK3P-201ENST00000527486 1297 ntBASIC6.98□□□□□ -1.29
SOX1O00570 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.98□□□□□ -1.29
SOX1O00570 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.98□□□□□ -1.29
SOX1O00570 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 AC104695.2-201ENST00000605056 775 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AL158211.4-201ENST00000606988 584 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC106028.5-201ENST00000610332 395 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC007497.1-201ENST00000610421 561 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 AL357080.1-201ENST00000617394 239 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC6.98□□□□□ -1.29
SOX1O00570 AC245014.3-201ENST00000618589 347 ntBASIC6.98□□□□□ -1.29
SOX1O00570 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SOX1O00570 MTND1P37-201ENST00000636562 264 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AP000550.3-201ENST00000637734 379 ntBASIC6.98□□□□□ -1.29
SOX1O00570 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
SOX1O00570 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SOX1O00570 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SOX1O00570 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
SOX1O00570 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 AC245505.2-201ENST00000553572 3055 ntBASIC6.97□□□□□ -1.29
SOX1O00570 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 AL121949.2-201ENST00000403446 1548 ntBASIC6.97□□□□□ -1.29
SOX1O00570 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SOX1O00570 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 RNU4-76P-201ENST00000364509 141 ntBASIC6.97□□□□□ -1.29
SOX1O00570 MIR181A1-201ENST00000385026 110 ntBASIC6.97□□□□□ -1.29
SOX1O00570 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 AL050335.1-201ENST00000396909 869 ntBASIC6.97□□□□□ -1.29
SOX1O00570 RPL17P17-201ENST00000419491 557 ntBASIC6.97□□□□□ -1.29
SOX1O00570 Z97055.1-201ENST00000419730 712 ntBASIC6.97□□□□□ -1.29
SOX1O00570 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.97□□□□□ -1.29
SOX1O00570 MRPS36P1-201ENST00000421291 307 ntBASIC6.97□□□□□ -1.29
SOX1O00570 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.97□□□□□ -1.29
SOX1O00570 DNAJC19P4-201ENST00000440115 345 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 COX6CP12-201ENST00000446748 202 ntBASIC6.97□□□□□ -1.29
SOX1O00570 TPT1P14-201ENST00000448018 505 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 DNAJB5P1-201ENST00000454004 806 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 RN7SL193P-201ENST00000491708 276 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 AC106872.5-201ENST00000508856 1416 ntBASIC6.97□□□□□ -1.29
SOX1O00570 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 AC008429.2-201ENST00000523057 864 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SOX1O00570 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms