Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.06□□□□□ -1.6
PDLIM1O00151 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 IGKV3D-34-201ENST00000522638 302 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.06□□□□□ -1.6
PDLIM1O00151 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM1O00151 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC010547.6-201ENST00000571789 193 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC063977.5-201ENST00000601044 974 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 AC244107.2-201ENST00000611773 76 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 RNA5SP440-201ENST00000612665 119 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 AC026124.2-201ENST00000621847 656 ntBASIC5.06□□□□□ -1.6
PDLIM1O00151 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
PDLIM1O00151 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM1O00151 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM1O00151 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.06□□□□□ -1.6
PDLIM1O00151 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM1O00151 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM1O00151 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM1O00151 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDLIM1O00151 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 SNORA64.1-201ENST00000362600 132 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 BMS1P17-202ENST00000416720 316 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 BX119321.1-201ENST00000428912 797 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.05□□□□□ -1.6
PDLIM1O00151 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 ARL4AP3-201ENST00000441452 574 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC064862.4-201ENST00000442180 334 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.05□□□□□ -1.6
PDLIM1O00151 RPL31P15-201ENST00000449770 338 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC133473.1-201ENST00000455173 299 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.05□□□□□ -1.6
PDLIM1O00151 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.05□□□□□ -1.6
PDLIM1O00151 AC093827.1-201ENST00000480094 861 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 DEFB109F-201ENST00000491870 277 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 MTATP6P1-201ENST00000514057 681 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 CYCSP22-201ENST00000517555 339 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 MRPS16P1-201ENST00000523462 412 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 HMGB1P42-201ENST00000532126 553 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC022884.2-201ENST00000578535 580 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AP005403.1-201ENST00000579720 229 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.05□□□□□ -1.6
PDLIM1O00151 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM1O00151 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 AC009303.3-201ENST00000591103 736 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 TAS2R6P-201ENST00000605022 826 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM1O00151 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.05□□□□□ -1.6
PDLIM1O00151 AC087565.3-203ENST00000641018 837 ntBASIC5.05□□□□□ -1.6
PDLIM1O00151 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.05□□□□□ -1.6
PDLIM1O00151 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDLIM1O00151 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 Y_RNA.62-201ENST00000362840 99 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 SNORA17A-201ENST00000391185 133 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AC240504.1-201ENST00000395709 845 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDLIM1O00151 RN7SKP16-201ENST00000410180 299 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 SDHDP6-201ENST00000414693 480 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 RPL34P3-201ENST00000421454 338 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 RFESDP1-201ENST00000422350 461 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AL161636.2-201ENST00000445179 927 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.04□□□□□ -1.6
PDLIM1O00151 OR6C72P-201ENST00000451403 892 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 LRRC37A14P-201ENST00000452297 462 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.04□□□□□ -1.6
PDLIM1O00151 RPL7P51-201ENST00000490532 749 ntBASIC5.04□□□□□ -1.6
PDLIM1O00151 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.04□□□□□ -1.6
PDLIM1O00151 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms