Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 RNU1-43P-201ENST00000365052 165 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 SNORA70.6-201ENST00000383934 134 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 RN7SKP278-201ENST00000410504 342 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AL158827.1-201ENST00000416300 391 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 PTP4A1P1-201ENST00000420539 515 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 CR848007.2-201ENST00000424918 787 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 SEC63P1-201ENST00000425785 1258 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AL139148.1-201ENST00000427122 680 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC023271.1-201ENST00000445936 1090 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 OR6C72P-201ENST00000451403 892 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AURKAPS1-201ENST00000451805 1212 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC239798.3-201ENST00000454459 408 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 IGBP1P4-201ENST00000503202 879 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 HMGN1P9-201ENST00000515212 298 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 OR4A46P-201ENST00000527255 933 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 NPM1P45-201ENST00000583151 559 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 OR7E18P-201ENST00000592589 702 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC126915.2-201ENST00000610957 190 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 AC019072.1-201ENST00000604535 1551 ntBASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SNX9Q9Y5X1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 RPS27AP6-201ENST00000427962 448 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 MTCO1P57-201ENST00000432182 261 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 SEPT7P3-201ENST00000455017 621 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC008953.1-201ENST00000497334 318 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 RPS4XP20-201ENST00000505751 772 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC006499.3-201ENST00000506077 748 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC112206.4-201ENST00000515142 405 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 SNORA70.17-201ENST00000516449 133 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SNX9Q9Y5X1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 MTND2P9-201ENST00000422293 931 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 AC007064.3-201ENST00000422608 359 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 MAPRE1P3-201ENST00000435438 796 ntBASIC5.68□□□□□ -1.5
SNX9Q9Y5X1 MYO5BP2-201ENST00000449815 1277 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms