Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SHANK2Q9UPX8 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 RNA5SP345-201ENST00000410646 108 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 EIF2S2P2-201ENST00000447161 982 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 HMGB1P4-201ENST00000455362 567 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 RPL23AP56-201ENST00000460778 453 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AC116553.2-201ENST00000564203 463 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 MLECP1-201ENST00000615893 709 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AC010928.1-201ENST00000592477 1447 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 MFSD8-220ENST00000641243 1422 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 AP000547.3-204ENST00000588548 2523 ntBASIC7.45□□□□□ -1.22
SHANK2Q9UPX8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 GPS2P1-201ENST00000411761 986 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AC114755.2-201ENST00000413520 361 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 RPL12P43-201ENST00000420608 499 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 RPSAP51-201ENST00000497462 645 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AC090058.1-201ENST00000498788 435 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 GLRXP2-201ENST00000555594 321 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AC125494.2-201ENST00000602431 657 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AL161637.1-201ENST00000622380 412 ntBASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SHANK2Q9UPX8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AP005432.1-201ENST00000580891 3485 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 SMG1P6-201ENST00000532337 2930 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC073143.1-201ENST00000436316 395 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC034236.1-201ENST00000469891 373 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC022034.3-201ENST00000471393 478 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AP001880.2-201ENST00000538233 448 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC018695.5-201ENST00000605872 315 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC104118.1-201ENST00000607625 1589 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 SNORA70.10-201ENST00000384515 134 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AL035079.1-201ENST00000405210 287 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AL450023.3-201ENST00000440592 271 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC010733.1-201ENST00000451515 401 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms