Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC131971.1-201ENST00000332881 1482 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RPL11P4-201ENST00000332269 436 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 FUNDC2P3-201ENST00000334716 533 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 Y_RNA.450-201ENST00000384198 113 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC008171.1-201ENST00000395058 200 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CIR1P3-201ENST00000405137 479 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RPL21P32-201ENST00000419877 477 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 Z68868.1-201ENST00000429048 544 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 TRIM60P16-201ENST00000444048 694 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC097463.1-201ENST00000447288 481 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RPL23AP28-201ENST00000448062 470 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RPL26P30-201ENST00000453533 435 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC098824.1-201ENST00000453565 980 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC027801.3-201ENST00000515049 698 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 RNU6-875P-201ENST00000516488 106 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC060775.1-201ENST00000518241 520 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 NPIPB14P-203ENST00000532298 987 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 ULK4P1-202ENST00000565174 503 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC004805.3-201ENST00000603178 310 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC005962.2-201ENST00000611427 652 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AC138649.3-201ENST00000622154 254 ntBASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
ZC3H4Q9UPT8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 NPL-212ENST00000614468 2376 ntTSL 5 BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.21□□□□□ -1.09
ZC3H4Q9UPT8 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 TMSB4XP4-201ENST00000323496 618 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 Y_RNA.9-201ENST00000362354 101 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 RNA5SP510-201ENST00000364697 99 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 Y_RNA.302-201ENST00000364997 102 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 RNA5SP172-201ENST00000365061 118 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AL512593.1-201ENST00000444758 779 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC069439.1-201ENST00000494739 167 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC091951.2-201ENST00000500762 203 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 AC010342.1-201ENST00000514047 877 ntBASIC8.21□□□□□ -1.1
ZC3H4Q9UPT8 SCARNA15.1-201ENST00000516384 125 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms