Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC009643.2-201ENST00000603543 1448 ntBASIC6.34□□□□□ -1.39
SCN11AQ9UI33 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 RPS3AP23-201ENST00000401762 784 ntBASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC012519.1-201ENST00000424588 610 ntBASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC026402.1-201ENST00000513642 170 ntBASIC6.34□□□□□ -1.39
SCN11AQ9UI33 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 TVP23CP2-201ENST00000571473 623 ntBASIC6.34□□□□□ -1.39
SCN11AQ9UI33 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SCN11AQ9UI33 KARSP3-201ENST00000571212 1504 ntBASIC6.34□□□□□ -1.4
SCN11AQ9UI33 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 CNOT7P1-201ENST00000429006 852 ntBASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 RPS5P7-201ENST00000456664 608 ntBASIC6.34□□□□□ -1.4
SCN11AQ9UI33 RPS23P7-201ENST00000466210 444 ntBASIC6.34□□□□□ -1.4
SCN11AQ9UI33 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AC019193.2-201ENST00000610012 634 ntBASIC6.34□□□□□ -1.4
SCN11AQ9UI33 AL137100.1-201ENST00000556703 1620 ntBASIC6.33□□□□□ -1.4
SCN11AQ9UI33 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 SNORA62-201ENST00000365493 153 ntBASIC6.33□□□□□ -1.4
SCN11AQ9UI33 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 RPL12P9-201ENST00000412942 488 ntBASIC6.33□□□□□ -1.4
SCN11AQ9UI33 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 MIR4277-201ENST00000578298 84 ntBASIC6.33□□□□□ -1.4
SCN11AQ9UI33 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN11AQ9UI33 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 RPL21P67-201ENST00000402896 478 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC097523.2-201ENST00000435551 652 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AL450023.3-201ENST00000440592 271 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC007537.2-201ENST00000472093 511 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC025164.1-201ENST00000496249 478 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC016559.2-201ENST00000510759 359 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC018695.5-201ENST00000605872 315 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC091932.2-201ENST00000623014 291 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 AC010168.2-201ENST00000562691 5428 ntBASIC6.32□□□□□ -1.4
SCN11AQ9UI33 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN11AQ9UI33 SOCS5P3-201ENST00000425115 1576 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 RNU11-201ENST00000387069 134 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 RNU1-82P-201ENST00000390851 165 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AL357515.1-201ENST00000402967 542 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 QRSL1P2-201ENST00000418582 964 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 RPS27AP6-201ENST00000427962 448 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 DNAJC19P7-201ENST00000428811 344 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC016831.4-201ENST00000438302 307 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AP003080.1-202ENST00000526526 915 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 DPPA3P2-201ENST00000553589 478 ntBASIC6.31□□□□□ -1.4
SCN11AQ9UI33 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms