Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC007382.1-201ENST00000624376 2618 ntBASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SHANK3Q9BYB0 RBPJP2-201ENST00000618187 1444 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 MSL3P1-202ENST00000440028 1468 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AL359955.1-201ENST00000455242 3275 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC107068.1-201ENST00000563286 4218 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 IGKV7-3-201ENST00000357453 298 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 RNA5SP397-201ENST00000391323 118 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 RPL12P34-201ENST00000424532 479 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC022360.1-201ENST00000521058 340 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC107980.1-201ENST00000558671 3355 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 MIR4444-1-201ENST00000581696 74 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 MIR4444-2-201ENST00000584390 74 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC017104.4-201ENST00000636283 1592 ntBASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.41□□□□□ -1.38
SHANK3Q9BYB0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 LRRC37BP1-201ENST00000398851 714 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AL158827.1-201ENST00000416300 391 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC008280.1-201ENST00000418851 412 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC097523.2-201ENST00000435551 652 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC023271.1-201ENST00000445936 1090 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 RPL7AP52-201ENST00000458096 790 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 RN7SKP67-201ENST00000515905 235 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC010424.2-201ENST00000607594 443 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC108359.1-201ENST00000616451 1211 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC021106.3-201ENST00000623925 531 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AP000547.3-204ENST00000588548 2523 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 AC004076.2-201ENST00000620532 3323 ntBASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SHANK3Q9BYB0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 AC123769.2-201ENST00000624332 5984 ntBASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 CYP1D1P-201ENST00000416662 1433 ntBASIC6.4□□□□□ -1.39
SHANK3Q9BYB0 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 ATG4AP1-201ENST00000416893 538 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 ARL2BPP10-201ENST00000446487 531 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC079168.2-201ENST00000453977 416 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 RN7SL244P-201ENST00000493405 297 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC116553.2-201ENST00000564203 463 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC115286.1-201ENST00000604298 434 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 AC093829.1-201ENST00000506662 1618 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 OR56B2P-202ENST00000641377 2453 ntBASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.39□□□□□ -1.39
SHANK3Q9BYB0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms