Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 CASKP1-201ENST00000412870 582 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 TBCAP2-201ENST00000416175 326 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC092651.1-201ENST00000426110 312 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 OR2A3P-201ENST00000493774 953 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 SAP18P1-201ENST00000512058 390 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC015795.1-201ENST00000513669 327 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 MRPL49P2-201ENST00000521066 465 ntBASIC8.18□□□□□ -1.1
IFT140Q96RY7 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC8.18□□□□□ -1.1
IFT140Q96RY7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
IFT140Q96RY7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 RAD17P1-201ENST00000418130 2042 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 SNORA11C-201ENST00000408532 129 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 GPS2P1-201ENST00000411761 986 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 RPS12P10-201ENST00000427031 377 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC009238.2-201ENST00000431026 355 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC090018.1-201ENST00000434369 367 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC084783.1-201ENST00000565846 910 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC006130.2-201ENST00000586202 326 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC022726.1-201ENST00000587475 207 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC012409.3-201ENST00000611343 981 ntBASIC8.17□□□□□ -1.1
IFT140Q96RY7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
IFT140Q96RY7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.17□□□□□ -1.1
IFT140Q96RY7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 RPS26P38-201ENST00000414476 348 ntBASIC8.16□□□□□ -1.1
IFT140Q96RY7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AP001324.1-201ENST00000428553 399 ntBASIC8.16□□□□□ -1.1
IFT140Q96RY7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AL162591.2-201ENST00000449634 317 ntBASIC8.16□□□□□ -1.1
IFT140Q96RY7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC079064.1-201ENST00000528365 362 ntBASIC8.16□□□□□ -1.1
IFT140Q96RY7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
IFT140Q96RY7 SALL4P2-201ENST00000423288 2910 ntBASIC8.16□□□□□ -1.1
IFT140Q96RY7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.16□□□□□ -1.1
IFT140Q96RY7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
IFT140Q96RY7 AL442639.1-201ENST00000625030 1899 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 SNORA11F-201ENST00000408237 128 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 OR4C10P-201ENST00000434991 931 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 HMGB1P4-201ENST00000455362 567 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC106806.2-201ENST00000509365 500 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 NDUFB4P12-201ENST00000513465 390 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC084824.2-201ENST00000548906 345 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC053481.3-201ENST00000577881 843 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 AC010424.2-201ENST00000607594 443 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 AL445567.2-201ENST00000618935 498 ntBASIC8.15□□□□□ -1.1
IFT140Q96RY7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC8.15□□□□□ -1.1
IFT140Q96RY7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms