Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC017079.1-201ENST00000333650 415 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 RN7SKP95-201ENST00000362860 303 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 QRSL1P2-201ENST00000418582 964 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 TCEA1P3-201ENST00000443005 880 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AL356981.1-201ENST00000454879 684 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 snoU13.20-201ENST00000459180 104 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 MRPS33P2-201ENST00000507850 322 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC138832.1-201ENST00000522871 556 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 TVP23CP2-201ENST00000571473 623 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC104687.2-201ENST00000604442 342 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC211433.2-201ENST00000608433 387 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AL356752.1-201ENST00000615844 593 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 MIR7155-201ENST00000615925 56 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC091905.4-201ENST00000623432 202 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC073869.10-201ENST00000642016 354 ntBASIC4.13□□□□□ -1.75
GAFA1Q96PS6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
GAFA1Q96PS6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC008079.2-201ENST00000623543 20396 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 RN7SKP104-201ENST00000362605 328 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 RNA5SP123-201ENST00000363244 119 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AL645927.1-201ENST00000396783 406 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 CHEK2P3-201ENST00000416118 248 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 BX119904.3-201ENST00000428194 957 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 RPL7P11-201ENST00000437586 658 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 TRY2P-201ENST00000448860 689 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 RN7SL97P-201ENST00000486780 299 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC004453.1-201ENST00000487895 408 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 OR2A3P-201ENST00000493774 953 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 AC100778.3-201ENST00000580060 1750 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 INTS6P1-201ENST00000504674 2530 ntBASIC4.12□□□□□ -1.75
GAFA1Q96PS6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.12□□□□□ -1.75
GAFA1Q96PS6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 MAPK10-338ENST00000641647 3362 ntBASIC4.11□□□□□ -1.75
GAFA1Q96PS6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GAFA1Q96PS6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms