Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC093909.5-201ENST00000621839 1799 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 BRWD1P3-201ENST00000428816 390 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 RPS21P4-201ENST00000487122 248 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 RNA5SP373-201ENST00000517271 95 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 AL390334.1-201ENST00000556395 450 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC005229.3-201ENST00000603438 323 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 BX005214.3-202ENST00000619809 325 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC004808.2-201ENST00000627965 773 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL21A1Q96P44 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
COL21A1Q96P44 AC011447.7-201ENST00000624228 1590 ntBASIC4.87□□□□□ -1.63
COL21A1Q96P44 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 DDX18P6-201ENST00000450119 1997 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 SNORA81-201ENST00000408493 178 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 SETP15-201ENST00000412724 337 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC010740.1-201ENST00000417035 684 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL161722.2-201ENST00000434731 981 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 BX842559.2-201ENST00000451418 605 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 UBA52P7-201ENST00000486088 380 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC015864.1-201ENST00000496512 544 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 RPS4XP20-201ENST00000505751 772 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC006427.1-201ENST00000514359 712 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 SNORA26.10-201ENST00000516427 141 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC027308.1-201ENST00000517993 110 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 DPRXP4-201ENST00000578053 568 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC011840.5-201ENST00000582125 771 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC008814.1-201ENST00000603797 406 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 SUMO2P15-201ENST00000604285 278 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AL589935.2-201ENST00000616471 1231 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL21A1Q96P44 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL21A1Q96P44 AC092747.4-201ENST00000620519 1861 ntBASIC4.86□□□□□ -1.63
COL21A1Q96P44 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.85□□□□□ -1.63
COL21A1Q96P44 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL21A1Q96P44 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL21A1Q96P44 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL21A1Q96P44 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL21A1Q96P44 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL21A1Q96P44 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
COL21A1Q96P44 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL21A1Q96P44 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms