Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC58Q96CX6 AC135068.12-201ENST00000637370 931 ntBASIC4.84□□□□□ -1.63
LRRC58Q96CX6 AC074101.1-201ENST00000637861 241 ntBASIC4.84□□□□□ -1.63
LRRC58Q96CX6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC58Q96CX6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
LRRC58Q96CX6 AC126323.6-202ENST00000568092 3511 ntBASIC4.84□□□□□ -1.64
LRRC58Q96CX6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRRC58Q96CX6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC005261.6-201ENST00000623072 1387 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AL391361.1-201ENST00000405580 489 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 RANP7-201ENST00000418085 644 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AL390119.1-201ENST00000440329 312 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 RANP1-206ENST00000455094 651 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 SIAH1P1-201ENST00000479411 923 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC090686.1-201ENST00000481577 749 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 RNU6-1334P-201ENST00000516032 105 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC051619.2-201ENST00000559063 397 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 MIR4489-201ENST00000578869 62 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 MIR1273E-201ENST00000581165 102 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC013244.1-201ENST00000604279 193 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC132825.8-201ENST00000640783 297 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 OR55B1P-203ENST00000641518 2602 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 AC097063.1-201ENST00000426714 1797 ntBASIC4.83□□□□□ -1.64
LRRC58Q96CX6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC58Q96CX6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC068446.1-201ENST00000556425 1549 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC112206.1-201ENST00000468416 477 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC073358.1-201ENST00000505671 684 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC008638.1-201ENST00000506035 866 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC074087.1-201ENST00000512059 724 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 RNA5SP362-201ENST00000516048 118 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 RNF138P2-201ENST00000603490 592 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AL589674.2-201ENST00000604304 337 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC010245.2-201ENST00000606908 1167 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 AC073869.7-201ENST00000640874 297 ntBASIC4.82□□□□□ -1.64
LRRC58Q96CX6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC58Q96CX6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 SALL4P2-201ENST00000423288 2910 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC58Q96CX6 MIR1178-201ENST00000408396 91 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 OR3A2-201ENST00000408891 1076 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 RN7SKP125-201ENST00000410481 302 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 EI24P4-201ENST00000423683 1078 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 RPS4XP16-201ENST00000427198 791 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 TXNP5-201ENST00000441043 315 ntBASIC4.81□□□□□ -1.64
LRRC58Q96CX6 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms