Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 RN7SL197P-201ENST00000466981 299 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 BTG4P1-201ENST00000510421 183 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC097486.1-201ENST00000515331 210 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 BUD31P1-201ENST00000521828 359 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC022404.1-201ENST00000555320 273 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 MIR4489-201ENST00000578869 62 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AP002884.5-201ENST00000595053 1132 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AP000894.4-201ENST00000610185 483 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 RPL23AP61-201ENST00000623642 466 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 AC114786.1-201ENST00000512892 1415 ntBASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CHMP4CQ96CF2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC114774.1-201ENST00000507410 1770 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 SPATA2P1-201ENST00000431223 2055 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 RPS3AP2-201ENST00000407190 754 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 RNU2-17P-201ENST00000410290 190 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AK4P4-201ENST00000419465 646 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC093155.2-201ENST00000420734 937 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 REREP1Y-201ENST00000422655 198 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 RPL12P18-201ENST00000437175 325 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC002504.1-201ENST00000438281 691 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 REREP2Y-201ENST00000439103 200 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 MTCYBP12-201ENST00000440559 1134 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC023512.1-201ENST00000444513 499 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 RPL6P5-201ENST00000445678 828 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC008379.1-201ENST00000463655 464 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 EIF3LP3-201ENST00000495197 822 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC021678.3-201ENST00000517893 476 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC104115.2-201ENST00000523026 687 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC096996.1-201ENST00000563813 325 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 MIR4505-201ENST00000582238 73 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 EIF1P5-201ENST00000585002 234 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC002069.2-201ENST00000603580 883 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 SUMO2P14-201ENST00000604488 293 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC004808.1-201ENST00000627671 721 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 TMEM30CP-203ENST00000637814 1035 ntBASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.74□□□□□ -1.33
CHMP4CQ96CF2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms