Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNED1Q8TER0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.11□□□□□ -1.43
SNED1Q8TER0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AL590240.1-201ENST00000334118 313 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 RN7SKP153-201ENST00000365026 316 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 U3.22-201ENST00000391120 215 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AC090018.1-201ENST00000434369 367 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 SLC25A18P1-201ENST00000449385 454 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AC111000.6-201ENST00000514471 709 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 TOMM20P2-201ENST00000540082 421 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AL110118.1-201ENST00000553543 400 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 MIR3160-1-201ENST00000577972 85 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AP000919.1-201ENST00000582850 985 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 SS18L2P2-201ENST00000583960 235 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 MIR7853-201ENST00000584820 132 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AP003400.6-201ENST00000624698 740 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 AP000547.3-204ENST00000588548 2523 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 XKRY2-202ENST00000623874 1581 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 XKRY-202ENST00000624960 1581 ntBASIC6.1□□□□□ -1.43
SNED1Q8TER0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
SNED1Q8TER0 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNED1Q8TER0 RNA5SP515-201ENST00000364570 118 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNED1Q8TER0 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL732292.1-201ENST00000426692 226 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 OR2B7P-201ENST00000429302 934 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AC000111.2-201ENST00000448200 210 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 OR1H1P-201ENST00000448731 937 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNED1Q8TER0 RN7SL443P-201ENST00000464331 290 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 PARP1P2-201ENST00000556806 195 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 MIR4277-201ENST00000578298 84 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 AP005119.2-201ENST00000579735 1105 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 AC020915.5-201ENST00000596836 964 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AC103792.1-201ENST00000603591 919 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL137246.1-201ENST00000607072 977 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL162574.1-201ENST00000615702 950 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 MIR6853-201ENST00000619642 74 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.09□□□□□ -1.43
SNED1Q8TER0 CCT8P1-201ENST00000413611 1657 ntBASIC6.09□□□□□ -1.43
SNED1Q8TER0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SNED1Q8TER0 AL137100.1-201ENST00000556703 1620 ntBASIC6.09□□□□□ -1.44
SNED1Q8TER0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SNED1Q8TER0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
SNED1Q8TER0 AL354868.1-201ENST00000417077 482 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 RPL10P17-201ENST00000453852 316 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 RN7SL197P-201ENST00000466981 299 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 OR11I1P-201ENST00000486033 954 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AK3P4-201ENST00000504283 583 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 IGKV2D-10-201ENST00000520194 281 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC068831.4-201ENST00000556118 109 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC005962.2-201ENST00000611427 652 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AL121873.1-201ENST00000616013 524 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC068724.3-201ENST00000625906 87 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AC139713.2-214ENST00000642059 1811 ntBASIC6.08□□□□□ -1.44
SNED1Q8TER0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SNED1Q8TER0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms