Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 PDCD5P1-201ENST00000543528 309 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC079905.1-201ENST00000549280 475 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 RBM22P12-201ENST00000567098 1255 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 MIR3154-201ENST00000577829 84 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC020658.4-201ENST00000613987 684 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 MIR6774-201ENST00000614651 70 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC009704.2-201ENST00000618739 483 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC111152.1-202ENST00000635848 339 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 SMG1P6-201ENST00000532337 2930 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 Z95327.2-201ENST00000414579 1873 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
CCDC71LQ8N9Z2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 SRRM1P3-201ENST00000426911 2678 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 MIR375-201ENST00000362103 64 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 RNA5SP477-201ENST00000362639 119 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC009302.1-201ENST00000417147 390 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 OR2AH1P-201ENST00000425717 928 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 BX323845.3-201ENST00000428215 527 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 GSTM5P1-201ENST00000434751 660 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC005297.1-201ENST00000444765 862 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC093166.3-201ENST00000448785 303 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 TPT1P1-201ENST00000458495 518 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC021006.1-201ENST00000489849 553 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 OR5H7P-201ENST00000514084 930 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 RN7SKP46-201ENST00000515942 234 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 SNORD39.2-201ENST00000579995 76 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AP001496.3-201ENST00000580230 913 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 VN2R3P-201ENST00000422626 1412 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AP001642.1-201ENST00000624727 2117 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC011447.7-201ENST00000624228 1590 ntBASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC71LQ8N9Z2 AC093535.2-201ENST00000624769 2326 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CASC19-204ENST00000641001 2055 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 OR52B1P-201ENST00000316506 909 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 SUGT1P2-201ENST00000379452 992 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AC104297.1-201ENST00000393779 870 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL035079.1-201ENST00000405210 287 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL390316.1-201ENST00000406279 553 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 SEPT7P8-201ENST00000413308 775 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 OR5M12P-201ENST00000423388 929 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL133173.1-201ENST00000423458 397 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 CLUHP1-201ENST00000435012 1190 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL512637.1-201ENST00000439523 1231 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 GAPDHP25-201ENST00000447061 1001 ntBASIC4.35□□□□□ -1.71
CCDC71LQ8N9Z2 AL031584.1-201ENST00000447169 754 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms