Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL034549.2-201ENST00000618285 3373 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL009179.1-201ENST00000406085 265 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MTCO2P8-201ENST00000412213 658 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MTCO2P23-201ENST00000425216 680 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MTCO1P51-201ENST00000427672 1060 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 HMGB3P5-201ENST00000428894 612 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 RPS26P4-201ENST00000431743 355 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC006335.2-201ENST00000437993 330 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 RPS26P41-201ENST00000450370 284 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AP006222.1-205ENST00000450734 457 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC105918.1-201ENST00000474399 838 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 RPS3AP15-201ENST00000483874 781 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 Y_RNA.717-201ENST00000517106 92 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC092868.3-201ENST00000560515 784 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC134669.1-201ENST00000581275 672 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC009237.13-201ENST00000603193 276 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC004775.1-201ENST00000607389 753 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AL139124.1-201ENST00000609123 421 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC013437.2-201ENST00000639587 677 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC087565.3-203ENST00000641018 837 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 CASC19-248ENST00000641674 1356 ntBASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.14□□□□□ -1.59
CLIP4Q8N3C7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AL731532.2-201ENST00000623542 1953 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 MIR365B-201ENST00000362317 111 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 RNA5SP394-201ENST00000364216 119 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AF228730.1-201ENST00000397972 663 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 CXADRP1-201ENST00000398098 1095 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 HMGB1P20-201ENST00000402555 677 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AL024507.1-201ENST00000412741 274 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 RPL7P56-201ENST00000429441 717 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 PTP4A1P3-201ENST00000433661 420 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 Z99127.2-201ENST00000441426 334 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC012512.1-201ENST00000446594 718 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 DUXAP8-207ENST00000456786 622 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC019084.1-201ENST00000457337 432 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC087672.1-201ENST00000479876 766 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 AC105233.1-201ENST00000498840 781 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 ENPP7P11-201ENST00000505915 627 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 MTCO1P31-201ENST00000506355 492 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 RNA5SP271-201ENST00000516700 88 ntBASIC5.13□□□□□ -1.59
CLIP4Q8N3C7 SNORA70.20-201ENST00000516848 126 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 474.8 ms