Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC71Q8IV32 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AL929601.4-201ENST00000613011 1341 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 RN7SKP16-201ENST00000410180 299 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 CTSL3P-202ENST00000412179 788 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 SLC35E1P1-201ENST00000419313 864 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 OR6C72P-201ENST00000451403 892 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AL035090.1-201ENST00000454835 332 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 SEPT7P6-201ENST00000469999 1143 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AP000797.2-201ENST00000475768 606 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AGGF1P3-201ENST00000493675 1213 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC012616.1-201ENST00000600294 197 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AL445222.1-201ENST00000607259 628 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC025574.2-201ENST00000615621 514 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 AC004817.4-201ENST00000602396 3625 ntBASIC4.98□□□□□ -1.61
CCDC71Q8IV32 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
CCDC71Q8IV32 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 MT-RNR2-201ENST00000387347 1559 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 Y_RNA.62-201ENST00000362840 99 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RN7SKP74-201ENST00000362849 309 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RNA5SP507-201ENST00000363603 121 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RPL21P67-201ENST00000402896 478 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL589994.1-201ENST00000404962 340 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RN7SKP273-201ENST00000411392 314 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RPS26P41-201ENST00000450370 284 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 OTX2P1-201ENST00000450956 354 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RPS12P31-201ENST00000491419 398 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL671862.1-201ENST00000515851 349 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RNU6-513P-201ENST00000516104 104 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL049874.4-201ENST00000557593 255 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 H3F3BP2-201ENST00000583907 357 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 VN1R81P-201ENST00000602085 372 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC024940.4-201ENST00000605507 246 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL136295.6-201ENST00000610486 658 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC244107.2-201ENST00000611773 76 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL118522.2-201ENST00000616045 615 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC073869.10-201ENST00000642016 354 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AL138820.1-201ENST00000617901 5305 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 AC104260.2-201ENST00000623551 3497 ntBASIC4.97□□□□□ -1.61
CCDC71Q8IV32 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC71Q8IV32 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms