Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL139124.1-201ENST00000609123 421 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC099654.3-201ENST00000447087 1546 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL390316.1-201ENST00000406279 553 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL354766.1-201ENST00000423396 542 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AL133372.1-201ENST00000493565 745 ntBASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS13CQ709C8 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 DNAJA1P3-201ENST00000399417 1194 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 RPS12P10-201ENST00000427031 377 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 FTH1P21-201ENST00000512179 511 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 ERG-205ENST00000398910 4954 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AL117378.2-201ENST00000622916 1337 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 SPATA31D3-201ENST00000445385 4785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 RN7SKP267-201ENST00000410381 285 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC008280.1-201ENST00000418851 412 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC073073.1-201ENST00000493920 463 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 RN7SL652P-201ENST00000577769 300 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AC039056.2-201ENST00000622261 511 ntBASIC3.91□□□□□ -1.78
VPS13CQ709C8 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS13CQ709C8 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS13CQ709C8 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS13CQ709C8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS13CQ709C8 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms