Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MIR6133-201ENST00000617057 108 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 SAMMSON-213ENST00000641336 1521 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 HCFC2P1-201ENST00000392864 1592 ntBASIC4.87□□□□□ -1.63
H3F3CQ6NXT2 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC104964.3-201ENST00000606115 2860 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RNU6-167P-201ENST00000384292 106 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RN7SKP126-201ENST00000411143 300 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC098592.2-201ENST00000413158 265 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC017019.1-201ENST00000426129 261 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 PSMD10P3-201ENST00000437000 448 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 OTX2P1-201ENST00000450956 354 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC097484.1-201ENST00000471148 389 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AP000797.2-201ENST00000475768 606 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RPS24P16-201ENST00000497294 392 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RN7SKP66-201ENST00000516681 231 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC012400.1-201ENST00000518452 381 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC022360.1-201ENST00000521058 340 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 MIR4646-201ENST00000580775 63 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AL162431.4-201ENST00000604674 411 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC133644.2-201ENST00000608142 540 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 MTCO1P1-201ENST00000624263 1081 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 AC135068.12-201ENST00000637370 931 ntBASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
H3F3CQ6NXT2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 RN7SKP74-201ENST00000362849 309 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 RNU6-729P-201ENST00000384399 107 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 RNU6-1263P-201ENST00000384601 106 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 MIR600-201ENST00000385007 98 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 EI24P3-201ENST00000399046 1062 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 MIR937-201ENST00000401271 86 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AL133270.1-201ENST00000402635 279 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 VN1R31P-201ENST00000417498 730 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 EI24P4-201ENST00000423683 1078 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC092647.2-201ENST00000452998 253 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC013701.1-201ENST00000522657 465 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AP000676.2-201ENST00000529711 301 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC092490.3-201ENST00000545370 572 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 MIR7853-201ENST00000584820 132 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 AC079298.1-201ENST00000625026 1619 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 MIPEPP2-201ENST00000422560 1819 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms