Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 RAB28P3-201ENST00000448325 597 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 SNORD125-201ENST00000459538 96 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC089999.1-201ENST00000460336 374 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 RPS17P5-201ENST00000498293 408 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 RNU6-319P-201ENST00000516025 108 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC008033.2-201ENST00000542626 177 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AL161616.1-201ENST00000611867 286 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC026367.3-201ENST00000619032 590 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 AC073869.8-201ENST00000641806 335 ntBASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LYSMD4Q5XG99 HSPD1P8-201ENST00000400121 1658 ntBASIC5.21□□□□□ -1.57
LYSMD4Q5XG99 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.21□□□□□ -1.57
LYSMD4Q5XG99 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 U3.3-201ENST00000362986 216 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 RNVU1-6-201ENST00000364688 164 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 RNU6-152P-201ENST00000384037 107 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL121977.1-201ENST00000401636 979 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL358178.1-201ENST00000407698 397 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 USP9YP19-201ENST00000412165 485 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 CHEK2P3-201ENST00000416118 248 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 TXNP2-201ENST00000443918 295 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 RPL31P20-201ENST00000449593 360 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 RN7SL481P-201ENST00000477764 299 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC058823.1-201ENST00000485315 474 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 HMGN2P25-201ENST00000486956 268 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 DUX4L52-201ENST00000549363 777 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC016839.1-201ENST00000578162 867 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC234771.5-201ENST00000600161 514 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL031320.1-201ENST00000604177 357 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC009027.1-201ENST00000604510 479 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC073111.2-201ENST00000605657 1075 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL356608.1-201ENST00000610034 820 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AL158062.1-201ENST00000619632 745 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC119674.1-220ENST00000641502 1048 ntBASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LYSMD4Q5XG99 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 RN7SKP95-201ENST00000362860 303 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC013470.3-201ENST00000420252 1194 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 RPS4XP16-201ENST00000427198 791 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC079168.1-201ENST00000458741 345 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 RN7SL346P-201ENST00000491561 294 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC008897.1-201ENST00000494006 347 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AK4P6-201ENST00000505168 528 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AP003080.1-202ENST00000526526 915 ntBASIC5.2□□□□□ -1.58
LYSMD4Q5XG99 AC021006.3-201ENST00000530771 192 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 1088.5 ms