Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 SNORD125-201ENST00000459538 96 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC108751.3-201ENST00000461814 1020 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 MIR3158-1-201ENST00000583596 81 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.41□□□□□ -1.7
LRRK2Q5S007 AL359715.3-201ENST00000569267 2123 ntBASIC4.41□□□□□ -1.7
LRRK2Q5S007 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LRRK2Q5S007 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC4.4□□□□□ -1.7
LRRK2Q5S007 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AC006511.3-201ENST00000624929 1783 ntBASIC4.4□□□□□ -1.7
LRRK2Q5S007 RNU1-13P-201ENST00000384499 162 ntBASIC4.4□□□□□ -1.7
LRRK2Q5S007 RNGTTP1-201ENST00000420965 728 ntBASIC4.4□□□□□ -1.7
LRRK2Q5S007 OR10T1P-201ENST00000424327 947 ntBASIC4.4□□□□□ -1.7
LRRK2Q5S007 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AC109464.1-201ENST00000511091 819 ntBASIC4.4□□□□□ -1.7
LRRK2Q5S007 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.4□□□□□ -1.7
LRRK2Q5S007 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRRK2Q5S007 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRRK2Q5S007 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LRRK2Q5S007 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 AL121977.1-201ENST00000401636 979 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC124944.2-201ENST00000429866 1242 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC079922.1-201ENST00000443291 359 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 VN1R34P-201ENST00000447387 883 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 SLC25A18P1-201ENST00000449385 454 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC091959.2-201ENST00000477363 321 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC006427.1-201ENST00000514359 712 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 AC073091.2-201ENST00000603205 907 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 AL450345.1-202ENST00000605741 3881 ntBASIC4.4□□□□□ -1.71
LRRK2Q5S007 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRK2Q5S007 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRK2Q5S007 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 PABPC1P8-201ENST00000452851 2086 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 CYCSP10-201ENST00000417973 294 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL451136.1-201ENST00000435399 325 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 OR7E125P-201ENST00000443450 846 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 HMGB1P4-201ENST00000455362 567 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL445687.2-201ENST00000458156 728 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC115286.1-201ENST00000604298 434 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL591034.3-201ENST00000605511 685 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC032011.1-201ENST00000611703 1549 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AC004076.2-201ENST00000620532 3323 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRK2Q5S007 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 AL009179.1-201ENST00000406085 265 ntBASIC4.39□□□□□ -1.71
LRRK2Q5S007 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRK2Q5S007 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms