Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RNU1-74P-201ENST00000384108 171 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RNU6-171P-201ENST00000384354 107 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AL391422.1-201ENST00000402155 436 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 MIR1203-201ENST00000408812 85 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RNA5SP156-201ENST00000410250 110 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC245060.4-201ENST00000413293 1121 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RBMY2KP-201ENST00000418221 992 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RPS7P8-201ENST00000418311 581 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC009506.2-201ENST00000420635 840 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 NMD3P2-201ENST00000421815 761 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC099677.3-201ENST00000427081 395 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 SPRYD7P1-201ENST00000443861 570 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AL353898.1-201ENST00000444055 238 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC006326.1-201ENST00000445465 787 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC104164.1-201ENST00000460282 590 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC004815.1-201ENST00000484185 331 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RPL38P3-201ENST00000484463 213 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 OR7E157P-201ENST00000494376 911 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC015864.1-201ENST00000496512 544 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 DUTP7-201ENST00000507982 486 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 VTA1P2-201ENST00000520205 911 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC004923.2-201ENST00000529649 369 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC084824.2-201ENST00000548906 345 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC002069.2-201ENST00000603580 883 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC108673.3-201ENST00000609183 335 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AL512652.1-201ENST00000619006 500 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 TMEM30CP-203ENST00000637814 1035 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC107027.3-201ENST00000565095 3473 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 AC017002.4-201ENST00000604721 1525 ntBASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDLIM3Q53GG5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC083899.1-201ENST00000454465 3819 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 RNU6-650P-201ENST00000365658 111 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 RANP4-201ENST00000413361 655 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL139128.1-201ENST00000413921 941 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL807761.1-201ENST00000417622 171 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 RPL35AP31-201ENST00000418340 337 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC006065.1-201ENST00000422539 802 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC022022.1-201ENST00000430304 178 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC099670.2-201ENST00000435130 321 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL035551.1-201ENST00000446931 348 ntBASIC4.76□□□□□ -1.65
PDLIM3Q53GG5 AL606490.1-201ENST00000452266 765 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms