Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC134669.1-201ENST00000581275 672 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 RNF138P2-201ENST00000603490 592 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL359091.2-201ENST00000609303 556 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AC008115.3-201ENST00000614874 549 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 MIR6813-201ENST00000621638 56 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 AL683826.1-201ENST00000624104 627 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC58Q4VC31 MIR193BHG-214ENST00000641765 509 ntBASIC4.59□□□□□ -1.67
CCDC58Q4VC31 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC58Q4VC31 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 RNA5SP46-201ENST00000362370 120 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 RN7SKP171-201ENST00000364417 303 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 BMS1P17-202ENST00000416720 316 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC093155.2-201ENST00000420734 937 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 OR2X1P-201ENST00000421144 687 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC066692.1-201ENST00000421721 457 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL139148.1-201ENST00000427122 680 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC004980.3-201ENST00000447046 365 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC073476.1-201ENST00000452854 407 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 GYG1P1-201ENST00000460864 698 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC005412.2-201ENST00000492004 341 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC097173.1-201ENST00000505862 819 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CYCSP22-201ENST00000517555 339 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 TRIM77BP-201ENST00000524985 1119 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 ARGFXP2-201ENST00000579304 949 ntBASIC4.58□□□□□ -1.68
CCDC58Q4VC31 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC58Q4VC31 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 OR13C1P-202ENST00000641378 2919 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 OR52B3P-201ENST00000314715 928 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 MIR708-201ENST00000390708 88 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 LAP3P1-201ENST00000403648 294 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 U3.32-201ENST00000408116 212 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC009237.10-201ENST00000414112 510 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 GAPDHP49-201ENST00000421421 961 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 GAPDHP34-201ENST00000432112 823 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 FMO7P-201ENST00000436045 768 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AL357520.1-201ENST00000441557 453 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC108161.1-201ENST00000461060 402 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AP002884.1-201ENST00000479691 655 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 RN7SL441P-201ENST00000492388 296 ntBASIC4.57□□□□□ -1.68
CCDC58Q4VC31 AC109481.1-201ENST00000509173 282 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms