Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFX4Q33E94 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX4Q33E94 MIR137-201ENST00000385223 102 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AL133388.1-201ENST00000404509 287 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 RPS26P4-201ENST00000431743 355 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 DHX9P1-201ENST00000436565 3076 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX4Q33E94 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX4Q33E94 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AC108161.1-201ENST00000461060 402 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AC007998.1-201ENST00000474156 672 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 RN7SL441P-201ENST00000492388 296 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX4Q33E94 PSMA2P2-201ENST00000504319 686 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX4Q33E94 SNORD46.2-201ENST00000516021 102 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.76□□□□□ -1.65
RFX4Q33E94 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.76□□□□□ -1.65
RFX4Q33E94 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFX4Q33E94 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AC116553.2-201ENST00000564203 463 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC015720.2-201ENST00000567709 334 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC010547.6-201ENST00000571789 193 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 MIR4505-201ENST00000582238 73 ntBASIC4.76□□□□□ -1.65
RFX4Q33E94 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX4Q33E94 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.76□□□□□ -1.65
RFX4Q33E94 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFX4Q33E94 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFX4Q33E94 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RFX4Q33E94 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFX4Q33E94 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFX4Q33E94 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.76□□□□□ -1.65
RFX4Q33E94 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFX4Q33E94 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.75□□□□□ -1.65
RFX4Q33E94 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.75□□□□□ -1.65
RFX4Q33E94 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 RNU4-44P-201ENST00000363050 141 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 RNA5SP510-201ENST00000364697 99 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 RNA5SP284-201ENST00000384547 118 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 SNORA79B-201ENST00000410557 148 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.75□□□□□ -1.65
RFX4Q33E94 FABP7P2-201ENST00000429946 379 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.75□□□□□ -1.65
RFX4Q33E94 NMNAT1P2-201ENST00000435192 860 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC104849.1-201ENST00000462623 405 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.75□□□□□ -1.65
RFX4Q33E94 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 BNIP3P35-201ENST00000604530 490 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 AC000068.2-201ENST00000608816 460 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.75□□□□□ -1.65
RFX4Q33E94 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.75□□□□□ -1.65
RFX4Q33E94 MIR1910-201ENST00000636955 80 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 AC138627.1-204ENST00000641894 765 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.75□□□□□ -1.65
RFX4Q33E94 AC097461.1-201ENST00000568928 2821 ntBASIC4.75□□□□□ -1.65
RFX4Q33E94 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.75□□□□□ -1.65
RFX4Q33E94 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFX4Q33E94 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFX4Q33E94 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.74□□□□□ -1.65
RFX4Q33E94 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFX4Q33E94 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.74□□□□□ -1.65
RFX4Q33E94 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFX4Q33E94 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.74□□□□□ -1.65
RFX4Q33E94 RNA5SP319-201ENST00000362768 119 ntBASIC4.74□□□□□ -1.65
RFX4Q33E94 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.74□□□□□ -1.65
RFX4Q33E94 OR4K12P-201ENST00000406538 961 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms