Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 ZNF652P1-201ENST00000442420 1309 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 CASC19-221ENST00000641309 1382 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
H3F3AP84243 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 THAP12P5-201ENST00000405864 2275 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 AC019072.1-201ENST00000604535 1551 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 CDC27P2-201ENST00000425026 1922 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
H3F3AP84243 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 RN7SKP273-201ENST00000411392 314 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 AC097484.1-201ENST00000471148 389 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 RN7SL177P-201ENST00000476596 299 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AL049874.2-201ENST00000492636 288 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AC093763.2-201ENST00000505334 1223 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.6□□□□□ -1.67
H3F3AP84243 AC006499.3-201ENST00000506077 748 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.6□□□□□ -1.67
H3F3AP84243 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 RNA5SP92-201ENST00000516437 110 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.6□□□□□ -1.67
H3F3AP84243 AC022832.1-201ENST00000530718 645 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.6□□□□□ -1.67
H3F3AP84243 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.6□□□□□ -1.67
H3F3AP84243 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.6□□□□□ -1.67
H3F3AP84243 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
H3F3AP84243 AC132825.8-201ENST00000640783 297 ntBASIC4.6□□□□□ -1.67
H3F3AP84243 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
H3F3AP84243 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3F3AP84243 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
H3F3AP84243 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
H3F3AP84243 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.67
H3F3AP84243 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
H3F3AP84243 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.59□□□□□ -1.67
H3F3AP84243 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.59□□□□□ -1.67
H3F3AP84243 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
H3F3AP84243 AL390316.1-201ENST00000406279 553 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 MIR1178-201ENST00000408396 91 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 RN7SKP126-201ENST00000411143 300 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 MTND6P5-201ENST00000448266 512 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 AC092647.2-201ENST00000452998 253 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 BX284632.1-201ENST00000478218 541 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AC020779.1-201ENST00000478757 796 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
H3F3AP84243 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.59□□□□□ -1.67
H3F3AP84243 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.59□□□□□ -1.67
H3F3AP84243 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.59□□□□□ -1.67
H3F3AP84243 AP002373.2-201ENST00000541631 1060 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.59□□□□□ -1.67
H3F3AP84243 OR11J2P-201ENST00000555298 907 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AL390726.5-202ENST00000564800 256 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AC127024.5-201ENST00000580085 462 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 PRPF19P1-201ENST00000584766 898 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AC011503.2-201ENST00000594230 1500 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 AL139407.1-201ENST00000613826 1175 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.59□□□□□ -1.67
H3F3AP84243 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.59□□□□□ -1.67
H3F3AP84243 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.59□□□□□ -1.67
H3F3AP84243 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.59□□□□□ -1.68
H3F3AP84243 AC073136.1-201ENST00000449426 2884 ntBASIC4.59□□□□□ -1.68
H3F3AP84243 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
H3F3AP84243 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
H3F3AP84243 AC025574.1-201ENST00000554784 1653 ntBASIC4.58□□□□□ -1.68
H3F3AP84243 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
H3F3AP84243 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
H3F3AP84243 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms