Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC133794.1-201ENST00000602731 914 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 AC010632.3-201ENST00000611377 369 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 AC018926.1-201ENST00000616335 435 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 AC095038.2-201ENST00000621464 1070 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 AC007683.2-201ENST00000624681 714 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLDN20P56880 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN20P56880 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLDN20P56880 AC073136.1-201ENST00000449426 2884 ntBASIC5.07□□□□□ -1.6
CLDN20P56880 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN20P56880 MTCO1P4-201ENST00000520516 1409 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN20P56880 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN20P56880 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN20P56880 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC096921.1-201ENST00000411661 375 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AL133173.1-201ENST00000423458 397 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 MTCO2P1-201ENST00000424648 477 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN20P56880 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 FCF1P6-201ENST00000456841 595 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 ATP5G1P3-201ENST00000463301 410 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 RN7SL205P-201ENST00000490174 284 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN20P56880 RNA5SP362-201ENST00000516048 118 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN20P56880 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC106730.2-201ENST00000566641 540 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 RBM22P12-201ENST00000567098 1255 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC016839.1-201ENST00000578162 867 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 MIR1273E-201ENST00000581165 102 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN20P56880 AL589674.2-201ENST00000604304 337 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 NANOGP3-201ENST00000605855 286 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC090617.9-201ENST00000623751 147 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC092159.4-201ENST00000624944 550 ntBASIC5.06□□□□□ -1.6
CLDN20P56880 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN20P56880 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN20P56880 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC068870.1-201ENST00000563737 2455 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 AL359715.3-201ENST00000569267 2123 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN20P56880 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 GAPDHP24-201ENST00000328713 983 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 RNA5SP326-201ENST00000363209 110 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 RNU6-925P-201ENST00000384629 104 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN20P56880 RPL26P37-201ENST00000411983 438 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 OR10T1P-201ENST00000424327 947 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN20P56880 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN20P56880 AL390119.1-201ENST00000440329 312 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CLDN20P56880 AL450023.1-201ENST00000450868 751 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 RPL23AP23-201ENST00000452590 471 ntBASIC5.05□□□□□ -1.6
CLDN20P56880 VDAC2P4-201ENST00000452925 711 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms