Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC113367.2-201ENST00000505749 160 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC121161.1-201ENST00000510606 652 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 GAPDHP71-201ENST00000511530 1003 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 ZNF519P4-201ENST00000514008 125 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 SNORA31.13-201ENST00000516624 135 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AP001000.1-201ENST00000526843 742 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 BTG1P1-201ENST00000540396 508 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.56□□□□□ -1.68
NKX2-1P43699 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC104229.1-201ENST00000561364 255 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC104072.1-201ENST00000568817 668 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-1P43699 BNIP3P40-201ENST00000596017 556 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC112503.2-201ENST00000609005 552 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 AC008759.3-201ENST00000613300 508 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 HTR1DP1-201ENST00000616500 888 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC009269.6-201ENST00000621778 588 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.56□□□□□ -1.68
NKX2-1P43699 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NKX2-1P43699 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AC027088.4-201ENST00000611559 1947 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NKX2-1P43699 AL034549.2-201ENST00000618285 3373 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.56□□□□□ -1.68
NKX2-1P43699 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.56□□□□□ -1.68
NKX2-1P43699 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.56□□□□□ -1.68
NKX2-1P43699 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 HSPA8P17-201ENST00000427029 1382 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 ADAM5-202ENST00000399789 1942 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 MIR16-2-201ENST00000362117 81 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RNA5SP110-201ENST00000362638 115 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RN7SKP250-201ENST00000363924 321 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
NKX2-1P43699 SNORA48.4-201ENST00000391089 134 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.55□□□□□ -1.68
NKX2-1P43699 RNU4-27P-201ENST00000410889 139 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 MTND4P11-201ENST00000417020 1058 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC092865.3-201ENST00000425390 1026 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 YWHAZP2-201ENST00000440317 728 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RNF2P1-201ENST00000442955 1010 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RPL7P33-201ENST00000444159 742 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 PPIAP7-201ENST00000454070 489 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RN7SL254P-201ENST00000460609 284 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RPS20P4-201ENST00000461659 355 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC044810.1-201ENST00000480271 711 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 RN7SL568P-201ENST00000493069 298 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 RPEP1-201ENST00000504507 658 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC091912.1-201ENST00000511351 248 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AP000620.1-201ENST00000527147 504 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.55□□□□□ -1.68
NKX2-1P43699 HMGB1P42-201ENST00000532126 553 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 OR4A41P-201ENST00000533053 928 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.55□□□□□ -1.68
NKX2-1P43699 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.55□□□□□ -1.68
NKX2-1P43699 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.55□□□□□ -1.68
NKX2-1P43699 AC096996.1-201ENST00000563813 325 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 AL078601.3-201ENST00000573303 535 ntBASIC4.55□□□□□ -1.68
NKX2-1P43699 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
NKX2-1P43699 ARGFXP2-201ENST00000579304 949 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms