Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HOXA13P31271 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA13P31271 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 AL450345.1-202ENST00000605741 3881 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA13P31271 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 MIR550A3-201ENST00000390735 95 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 RPS26P13-201ENST00000419030 330 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 AL161722.2-201ENST00000434731 981 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC016772.1-201ENST00000444170 1261 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXA13P31271 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 IMPA1P1-201ENST00000510718 842 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC117525.1-201ENST00000515228 503 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXA13P31271 AP006245.2-201ENST00000522004 300 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXA13P31271 OR5AZ1P-201ENST00000527448 943 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA13P31271 HMGN2P47-201ENST00000559378 272 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXA13P31271 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC008536.1-201ENST00000602872 669 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC073111.2-201ENST00000605657 1075 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AP005432.2-201ENST00000608162 586 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 Mico1.1-201ENST00000611698 204 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC003001.2-201ENST00000616294 831 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 MIR6839-201ENST00000620425 113 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
HOXA13P31271 AC091948.2-201ENST00000636510 279 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXA13P31271 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.88□□□□□ -1.47
HOXA13P31271 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA13P31271 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
HOXA13P31271 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXA13P31271 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 CHMP1B2P-201ENST00000399581 597 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AL589655.1-201ENST00000405398 482 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AC106901.1-201ENST00000425086 698 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 BX323845.1-201ENST00000432417 179 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 NDUFA5P1-201ENST00000433858 341 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA13P31271 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXA13P31271 AL606490.8-201ENST00000441624 319 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXA13P31271 MORF4L1P4-201ENST00000450245 976 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 MTND2P3-201ENST00000452458 470 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AC089999.1-201ENST00000460336 374 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 RPS24P16-201ENST00000497294 392 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXA13P31271 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA13P31271 OR4V1P-201ENST00000525394 1140 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AP003168.1-201ENST00000530091 307 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA13P31271 AC027281.1-201ENST00000574178 758 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA13P31271 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXA13P31271 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA13P31271 BNIP3P35-201ENST00000604530 490 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 AL162574.2-201ENST00000614618 657 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 NXF4-202ENST00000416098 1465 ntBASIC5.87□□□□□ -1.47
HOXA13P31271 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA13P31271 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXA13P31271 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
HOXA13P31271 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA13P31271 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA13P31271 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA13P31271 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXA13P31271 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA13P31271 RNU6-670P-201ENST00000364312 104 ntBASIC5.86□□□□□ -1.47
HOXA13P31271 AL353625.1-202ENST00000366273 571 ntBASIC5.86□□□□□ -1.47
HOXA13P31271 SNORA51.8-201ENST00000384234 132 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms