Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
CLIP1P30622 AC079741.1-201ENST00000321498 212 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 RNA5SP191-201ENST00000362585 102 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 COX5BP7-201ENST00000414780 274 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP1P30622 SCAND3P1-201ENST00000439854 1060 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 OR52J1P-201ENST00000450596 932 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.92□□□□□ -1.14
CLIP1P30622 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC7.92□□□□□ -1.14
CLIP1P30622 C1GALT1P3-201ENST00000522049 819 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 NDUFB4P11-201ENST00000560510 395 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.92□□□□□ -1.14
CLIP1P30622 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.92□□□□□ -1.14
CLIP1P30622 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CLIP1P30622 TTC41P-205ENST00000551270 3963 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 TRIM51GP-201ENST00000534741 1350 ntBASIC7.92□□□□□ -1.14
CLIP1P30622 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP1P30622 RNU1-32P-201ENST00000363937 159 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 RNU2-50P-201ENST00000410494 143 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 AC079809.1-201ENST00000415468 276 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 AURKAPS2-201ENST00000454983 333 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 RPL23AP56-201ENST00000460778 453 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP1P30622 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.91□□□□□ -1.14
CLIP1P30622 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.91□□□□□ -1.14
CLIP1P30622 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 AL512782.1-201ENST00000603093 364 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 AC104687.2-201ENST00000604442 342 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 CR381572.2-201ENST00000624852 397 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 SAMMSON-226ENST00000642089 1582 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP1P30622 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC7.91□□□□□ -1.14
CLIP1P30622 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CLIP1P30622 AC099654.2-201ENST00000433031 1980 ntBASIC7.91□□□□□ -1.14
CLIP1P30622 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CLIP1P30622 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 AC004817.4-201ENST00000602396 3625 ntBASIC7.9□□□□□ -1.14
CLIP1P30622 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP1P30622 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP1P30622 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP1P30622 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP1P30622 NDUFA12P1-201ENST00000455914 406 ntBASIC7.9□□□□□ -1.14
CLIP1P30622 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP1P30622 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC7.9□□□□□ -1.14
CLIP1P30622 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.9□□□□□ -1.14
CLIP1P30622 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.9□□□□□ -1.14
CLIP1P30622 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.9□□□□□ -1.14
CLIP1P30622 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CLIP1P30622 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CLIP1P30622 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.9□□□□□ -1.14
CLIP1P30622 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CLIP1P30622 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CLIP1P30622 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.9□□□□□ -1.15
CLIP1P30622 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP1P30622 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 SNORA73.1-201ENST00000363107 205 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 U3.30-201ENST00000391308 210 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 TBCAP2-201ENST00000416175 326 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CLIP1P30622 RPL5P2-201ENST00000429598 854 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.89□□□□□ -1.15
CLIP1P30622 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 FTH1P2-201ENST00000466086 412 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 AC006967.1-201ENST00000467608 589 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 NIFKP7-201ENST00000503365 834 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 AC100784.1-201ENST00000522790 310 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 AP006289.1-201ENST00000538089 277 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP1P30622 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP1P30622 TVP23CP2-201ENST00000571473 623 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CLIP1P30622 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC7.89□□□□□ -1.15
CLIP1P30622 AC073869.10-201ENST00000642016 354 ntBASIC7.89□□□□□ -1.15
CLIP1P30622 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP1P30622 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CLIP1P30622 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.89□□□□□ -1.15
CLIP1P30622 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CLIP1P30622 AC109446.4-201ENST00000623235 2755 ntBASIC7.88□□□□□ -1.15
CLIP1P30622 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CLIP1P30622 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.88□□□□□ -1.15
CLIP1P30622 AL357515.1-201ENST00000402967 542 ntBASIC7.88□□□□□ -1.15
CLIP1P30622 AC092570.3-201ENST00000420113 693 ntBASIC7.88□□□□□ -1.15
CLIP1P30622 AC010733.1-201ENST00000451515 401 ntBASIC7.88□□□□□ -1.15
CLIP1P30622 AC105129.1-201ENST00000560250 297 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms